Gene Swit_1571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1571 
Symbol 
ID5197584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1747355 
End bp1748722 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content65% 
IMG OID640581119 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001262072 
Protein GI148554490 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGCCG TTTCCTGGTC TAGCGAAATC GACCGGCCTG AAGACAGGCA CCGGATCATG 
ATGAGGAGAG GATCATTGGA CCAGTCGCAG GCACGCGCGG TGCTCTCCGC GCCACTCACG
ATCAACAGCG TGACGCTTCC GAACCGGATC GTCATGGGGC CGATGGCCGC GAACTCGCCC
GAGCCGGACG GGCGTCCGGG CGACCAGACC GTCGCCTTCT TCGAGCGCCG CGCACGGGGC
GGCGTCGGCA TGATCATCGC GGGCGGCGTC AACTCGACCA GGCGCTCCTA CGAAGAGACA
TGGTTTCGAC CGCTGCTCAG GCTCGAAACG GACGAATTCC TGCCGGAATT CCGCAAGGTC
GCGGACGCCG TGCACGCGCA TGACATCCCG CTCATCGCCG AGATCATGCC GGGCTTCGGC
CGCATGGGCG TGCCGGGCAA GACGCGGCCG ATCATCTCGG CAAGCCCGAT GAACGTCGTC
ATACCAGAGC AGAATTTTCC CAATGGCGTC ATCGTGCCGG GGGGACGCTC GACGCCCGTG
CCCGATGAAG CGAGCATCGC CGAGATCGAA GCGTTCGAGC AGGAGATGAT CCTGACCGCC
GAGCGGGCAA TGCGGGCCGG ATGGGACGGC GTCGAAGTCG CCGCGCATAT GAGCTATTTC
GCGTCCTCCT TCCTCTCCCC GCGGACCAAC TGGCGCACCG ACCGATATGG CGGATCGGTC
GAGAATCGCG CCCGCTTCCT GGTGAACATC GTCGCCGGGA TCCGCCGCAA GCTCGGCAAC
CATTTCGTCG TCGGCCTACG CATCATTGCC AACGATTATA TGGAACCCAG CCCCGGCCCC
GAGGGGTTCG CCGCGATCGC GAAAAAGGTC GAGGAGGCAG GGATCGATTA TGTCGCGCTG
TCCACCGGCT GTTACGAAAG GATGGCCGAC AGCGCACCGA TGGTCGACGG AGCCCTGATC
GACAGCGGCG ATGCGATGAT CTTCAAGAAG GCGCTCTCGG TGCCGGTCCT GCTCCAGGGG
CTGCACGATC CGATGAACGC GGCGCGCGCG ATAGCGGAGG GGCATGGCGA CGCGGTGATG
CTCGCGCGCC AGATGCTGGC CGATCCCGAT TATGCCCGAA AGGCGACGGA CGGGGATTTC
GAGAAGATCG TCCGCTGCGA TCGCGGCAAT TACTGCATGC GGCGGCTGGT GCTCGGGATG
CCGATCCGCT GCAAGCTCAA CCCCCAGATG GGCCGGGAGA GCCGACGCGG CGCCGTCCCC
CCGCCGGATC GGCTGATCAA GGCGCCGATC GAACAAGCGG TGCTTGCCGC GACCGGTTCG
CCGACGCTCA TGGGCATCGC CGGCAAGTTC GTCCGCAAAT CCCACTGA
 
Protein sequence
MGAVSWSSEI DRPEDRHRIM MRRGSLDQSQ ARAVLSAPLT INSVTLPNRI VMGPMAANSP 
EPDGRPGDQT VAFFERRARG GVGMIIAGGV NSTRRSYEET WFRPLLRLET DEFLPEFRKV
ADAVHAHDIP LIAEIMPGFG RMGVPGKTRP IISASPMNVV IPEQNFPNGV IVPGGRSTPV
PDEASIAEIE AFEQEMILTA ERAMRAGWDG VEVAAHMSYF ASSFLSPRTN WRTDRYGGSV
ENRARFLVNI VAGIRRKLGN HFVVGLRIIA NDYMEPSPGP EGFAAIAKKV EEAGIDYVAL
STGCYERMAD SAPMVDGALI DSGDAMIFKK ALSVPVLLQG LHDPMNAARA IAEGHGDAVM
LARQMLADPD YARKATDGDF EKIVRCDRGN YCMRRLVLGM PIRCKLNPQM GRESRRGAVP
PPDRLIKAPI EQAVLAATGS PTLMGIAGKF VRKSH