| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1568 |
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| Symbol | |
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| ID | 5197581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1743395 |
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| End bp | 1744861 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640581116 |
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| Product | succinate semialdehyde dehydrogenase |
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| Protein accession | YP_001262069 |
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| Protein GI | 148554487 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGT TGAACGACAA AGCGCTTTGG CGCGCGGCGG CCTATGTCGA CGGGAGCTGG
ATCGCGCAGG GCGAGCAAGG GTCGCGGCCG TTGTTCAACC CTTCGACCGG CGAACGGCTG
GCGGACATTC CGCAGCTCGG CGCCGGACAG ACCCGCGAAG CGATCGAGGC CGCCCACGCC
GCCCTGCCCG CCTGGCGGGC GAGCACGGCC AAGGAACGCG CCATCATCCT GAGGCGGTGG
TTCGACCTGA TCGTCGCGAA CAGCGACGAC CTGGCCCGGA TCATCGTCCT GGAGGAAGGA
AAACCCTTCG CGGAGGCGAA GGGCGAGATC GCCTATGCGG CATCGTTCGT CGAATGGTTC
GCCGAAGAGG CCAAGCGCGT CAAAGGCGAC GTGATGGCGG GGACCGAGCC CGGCCGCAGG
ATCGTCACGC TCAAGGAGCC GATCGGCGTC TGCGCGGCGA TCACGCCCTG GAATTTCCCG
GCTGCGATGA TCACGCGCAA GGCGGCGCCG GCCCTGGGCG CAGGCTGCAC GATGGTGGTC
AAGCCCGCGG AGCAGACGCC GCTCACGGCC TTCGCCCTGG CCGAACTGGC CGAGCGCGCG
GGGGTTCCGG CCGGCGTGCT CAACATCGTG ACGGGCCAGG CCCGCACCAT CGGCGCCGAG
CTGACGGGCA ACCCGCTCGT CAGGAAGATC ACCTTCACGG GCTCGACCGA GGTCGGTCGC
ATCCTGATCG CCCAGTCTGC CGCGACGATC AAGAAGACCT CCATGGAACT GGGCGGAAAT
GCGCCCTTCC TCGTGTTCGA CGATGCCGAT GTGGACCAGG CCGTGGCCGG CCTGATCGCC
ACGAAGTACC GGAACACGGG CCAGGCCTGC ATCAGCGCCA ACCGGATCTA TGTCCAGGAC
GGCATCTACG ACGCGTTCGT GGCCGCCCTC GCCTCGGCCG TGGCGCGACT CAAGGTCGGC
GACGGGTTCG AGGAAGGCGT GCAGCAAGGC CCCCTGATCG ACGACGACGC CGTGACCAAG
GTCGAGGCGC ATATCGCCGA CGCGGTCGGC AAGGGGGCCA AGGTCGCCCA GGGCGCGCGC
CGCCATTCCC GGGGCGGCCT CTTCTTCGAG CCGACCGTCC TCATCGACGT GACGCAGGAC
ATGCTGATCT GCCGGGAGGA GACCTTCGGG CCGGTCGCGC CGGTGGTCCG CTTCTCGGAC
GAGGCCGAGG CCATCCGTCT GGCGAACGAC ACCGAGTTCG GGCTGGCCGC CTATCTCTTC
TCGCGCGACG CCGAACGCAT CTGGCGGGTC GCGGCGGCGC TCGAATCGGG AATGGTCGGG
ATCAACACCG GCGCGATCTC GAACGAGGTG GCGCCCTTCG GCGGCGTCAA GCAGTCGGGC
CTCGGCCGCG AGGGTTCGAT CTACGGCATC GACGAGTATC TCGAGACCAA ATATCTCGCA
TGGCACGGTG CCGGCGGCAT CGGATAG
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| Protein sequence | MKLLNDKALW RAAAYVDGSW IAQGEQGSRP LFNPSTGERL ADIPQLGAGQ TREAIEAAHA
ALPAWRASTA KERAIILRRW FDLIVANSDD LARIIVLEEG KPFAEAKGEI AYAASFVEWF
AEEAKRVKGD VMAGTEPGRR IVTLKEPIGV CAAITPWNFP AAMITRKAAP ALGAGCTMVV
KPAEQTPLTA FALAELAERA GVPAGVLNIV TGQARTIGAE LTGNPLVRKI TFTGSTEVGR
ILIAQSAATI KKTSMELGGN APFLVFDDAD VDQAVAGLIA TKYRNTGQAC ISANRIYVQD
GIYDAFVAAL ASAVARLKVG DGFEEGVQQG PLIDDDAVTK VEAHIADAVG KGAKVAQGAR
RHSRGGLFFE PTVLIDVTQD MLICREETFG PVAPVVRFSD EAEAIRLAND TEFGLAAYLF
SRDAERIWRV AAALESGMVG INTGAISNEV APFGGVKQSG LGREGSIYGI DEYLETKYLA
WHGAGGIG
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