Gene Swit_1563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1563 
Symbol 
ID5199625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1738362 
End bp1739384 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content66% 
IMG OID640581111 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001262064 
Protein GI148554482 
COG category[R] General function prediction only 
COG ID[COG2514] Predicted ring-cleavage extradiol dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATCG GCGGTATCGA GAGTGTCGTT TACGGCGTCG ACGATCTGGA CGTGTCGGCT 
CGCTTCTATG ACGACTTCGG GCTGAAGGCG GTGCGCCGCA GCGATGCGGA GGTCGTCTAT
CGTCTCGACG AAGGCTCCCG CGTCGTCTTG CGCCACGCGG AAGACCCGTC CCTCCCGCCG
CGCCATTATG ACGGTTGCGG CGTACGCGAG ACCTTCTATG GCGTCGATTC GCGGGAAGAG
CTTGCGCACT ATGCCGAGCG GATCGGCGCC GATCGCGAGC TGCGCTGGTC GGGCGACGGC
GACACCATCC ACTTCCTTGC CGATGGCGGA ATCCCGCTGG GATTGCGCCT GTGGCGCCGC
CAGCCGGTCG TCTACGCCCC GGACCCCGTC AACGCGCCCG ACAATGTGAA GCGGCTGAAC
CAGCATCGCC GCTGGCGCGT GCGCGCCGTT CCCAAGACCA TCAACCATGT GGTGTGGCGG
GTCGCCGACA TCCACGCCTG CTTCGCCTTC TTCCGCGACC GGCTGGATTT CCGGATGACC
GATTATCAGA AGGACGCCGG GGTCTTCGGT CGCCCGGCCG CCGCCGCCCA GCACCATACG
GTCTATTTCC AGAAGTTCGA TGCGCTGCCC CCGTTCACCC AGGGGTTCGA TCACATCGCC
TTCGGCGTCG AGGATATCGA CGAGATCTAT GCCGGGTGGA ATTACATGGA GCGGCGCGGG
CATCGAAATC CGCTCGGCGG CGTCGGACGA CACCGCATCG CCTCCGCGCT TTTCTGCTAT
TTCGATGCCC CGTGCGGCGG GATGGCCGAA TATGGAGCAG ACACCGACTA TCTCGACGAC
AACTGGGTCC CCCGCGTCTG GGAGGCGCGG TTCGGCGGTT TCATGTGGAC CAGCCGGGTG
CTGCCCTTCC TGCCGGAGGA ACTGAGCTGG GAAGTCTCGC TCGACCAGTC GGCGCTACCC
CAGGGGGCGA TACCCGTGAA GGTCCGATAT CCCGCCGAGC CCGCAGTCGA CAGCCACGGC
TAG
 
Protein sequence
MPIGGIESVV YGVDDLDVSA RFYDDFGLKA VRRSDAEVVY RLDEGSRVVL RHAEDPSLPP 
RHYDGCGVRE TFYGVDSREE LAHYAERIGA DRELRWSGDG DTIHFLADGG IPLGLRLWRR
QPVVYAPDPV NAPDNVKRLN QHRRWRVRAV PKTINHVVWR VADIHACFAF FRDRLDFRMT
DYQKDAGVFG RPAAAAQHHT VYFQKFDALP PFTQGFDHIA FGVEDIDEIY AGWNYMERRG
HRNPLGGVGR HRIASALFCY FDAPCGGMAE YGADTDYLDD NWVPRVWEAR FGGFMWTSRV
LPFLPEELSW EVSLDQSALP QGAIPVKVRY PAEPAVDSHG