| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1562 |
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| Symbol | |
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| ID | 5198538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1736972 |
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| End bp | 1738324 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640581110 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001262063 |
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| Protein GI | 148554481 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.384388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCG AGGCACTTCC AGGTCAAAAT GACAGGGCCG GGCTCTATCC CTGGTATGTC
CTCGGCGTCC TTCTGCTCGT CGGCATGGCT TCCTACCTCG ATCGCTACAT CGTCGCGCTG
CTGATCGAGC CCATCAAGAC CGACCTGGCC TTGTCGGACA CGAAGGTCAG CCTGCTCCAG
GGAACCGCGT TCGCGATCTT CTTCGTGGCG TTCGGCCTGC CCTGCGGCGC GTTGGTCGAT
CGGACCAATC GCCGGACCAT GCTTGCGCTG GGGATCGCGA TCTGGAGCGT CATGACCGCG
GCCGGTGGTT TCGCGCAGAC CTATTGGGAG TTATTCGCCT CGCGCGCCGG CGTCGGGATT
GGCGAGGCTT GCCTCGCCCC TGCCGCCTTC TCGCTCATCG CCGACTATTT TCCGCCATCC
CGCCGCGGTC GGGCGATGAG CATCTACAAT ATGGCCAATT ATCTCGGCGG CGGCGCATCA
CTGTTGATCG GCGGGCTGGT GCTCGGCTTG CTCGAGCATT CGAGCGCCAA CCTGTTGCCG
ATGCTTGGCG AACTCCCAAG CTGGAAGGCG ACCTTCATCA TCGTCGGCGC GCCGGGCCTG
CTGCTCGCGG CGCTGATGTT CACCATCCGC GAGCCCCGGC GGAGAGAAGG CGTCAGCGCA
GCCGCCGGAA CCGGAAGTGC GGAAGGCTTT GTCCGTCATA TGCGCCACGC GCCGGGGGTC
TACGGCGCCG TCCACTTCGT CTCGGCGATG ACCGCGTTCG TTGGATTCGG CGTGGCCTCC
TGGGTGGCCA CCTACTTTGT GAGGACGTTC GGGCTGAAGC CGTCGGAGGC CGGGCTTCTG
GTCGGCCCGG TCAGCGCCAT GAGCGGTGTG ATCGGGTGTA TATTGAGCGG CATGACCAGC
GACTGGCTGG TGAGGCGCGG CGTCAGGGGC GGCCGCTTCC TTCTGCCGCT CATCTGGTGG
CCGGCCGCGC TGATCGGGCT GAGCGTGATC GTCCTGTCGT CGAGCCAGTC GCTGGCGCTG
ACCGGCGTAG GGATCTTCAT GACGGGGAGC GGCTTCGGCC TTGCGAGCGT GATGCCGACC
ATCCACGATA TCACGCCCAA TCAATTCCGA GGACGGGCAA CCTCGCTGCA CTTCGTGCTC
GCGGGGGTTC TGGCGTTCGG ATCCGCCGCC ACGTTCATCG CGTTCGTCAA CGACCTGCTG
TTCGACGACC CGGCGGCGCT TGGCCATTCC ATGCTGATCG TGATGACGCC GATCATGCTC
CTGGGCTTCG TCGTCTGCGC CGCCATGCGA TCGCGGTACG ACGCCGTCCG CCGGCACTAT
GCGCAGATGC GGACGCCGAC ACCCGCATCG TGA
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| Protein sequence | MKAEALPGQN DRAGLYPWYV LGVLLLVGMA SYLDRYIVAL LIEPIKTDLA LSDTKVSLLQ
GTAFAIFFVA FGLPCGALVD RTNRRTMLAL GIAIWSVMTA AGGFAQTYWE LFASRAGVGI
GEACLAPAAF SLIADYFPPS RRGRAMSIYN MANYLGGGAS LLIGGLVLGL LEHSSANLLP
MLGELPSWKA TFIIVGAPGL LLAALMFTIR EPRRREGVSA AAGTGSAEGF VRHMRHAPGV
YGAVHFVSAM TAFVGFGVAS WVATYFVRTF GLKPSEAGLL VGPVSAMSGV IGCILSGMTS
DWLVRRGVRG GRFLLPLIWW PAALIGLSVI VLSSSQSLAL TGVGIFMTGS GFGLASVMPT
IHDITPNQFR GRATSLHFVL AGVLAFGSAA TFIAFVNDLL FDDPAALGHS MLIVMTPIML
LGFVVCAAMR SRYDAVRRHY AQMRTPTPAS
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