| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1558 |
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| Symbol | |
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| ID | 5198534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1732539 |
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| End bp | 1733834 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640581106 |
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| Product | fumarylacetoacetase |
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| Protein accession | YP_001262059 |
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| Protein GI | 148554477 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | [TIGR01266] fumarylacetoacetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.492356 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACG AAACGCATGC CGCTTCGGCG TCGAGCTGGG TGGAGGGCGC CGCCGGCCAC
CGCGAGTTCC CCGTGCAGAA CCTGCCTTAC GGCATCTTCA CGGCGCCGGG CGCCCCGCCG
CGCGCCGGCG TCGCGATCGG CGATCATGTC CTGGGCCTGG GCGCCGCGGC CGACCTGCTG
GACGGAAGGG CGCGATCGGC CGCGCAGGCG GTCGGCGAGG AGCAGCATCT CAACCGCCTG
CTGGCGGAGC CGGCCGAATC CCGGGCAGCG CTGCGGCAAG GCCTTTTCCG TCTGCTGAGC
GACCGGTCCT TCGAGAAGCG CGTGCGGCCG CTGCTGTTCA GGCAGGCGAA CTGCCAGCTC
GGGTTGCCGG CGAAGATCGG GGACTATACC GACTTCTATG CGGGCATTCA CCATGCCCGC
GCCGTCGGCG CCCTGCTCCG CCCCGACAAT CCGTTGCTAC CCAACTACAA ATATGTGCCG
ATCGGCTATC ATGGACGCGC CTCTACGGTG CGCGCCTCGG GCGCCGACGT GGTCCGGCCG
CGGGGCCAGG TTCGCGCCGG CGACACCCCT CCCGCGCTCA GCGAGACGCG CAGGCTCGAT
CTTGAGTTGG AGCTCGGTCT TTGGGTCGGT GGTGCCCCGA ACGACGACGG CCCGGTCCCG
ATCTCGGCCG CGGCGTCGAG GATCGCCGGA CTGTCCCTGC TCAACGACTG GTCGGCGCGC
GACGTCCAGG CCTGGGAATA TCAGCCGCTC GGGCCGTTCC TCGCGAAGAA CTTCCTGACC
ACCGTATCGC CCTGGATCGT GACCACCGAA GCCCTGGCGC CTTTCAGGGT CGCACCCACG
AACCGCGAGC CTGGCGACCC GTCGCCGCTG GACTATCTGT TCGACCGCAA CGATCAGTCG
CTCGGGGCGT ATGACATCCG GATCAGGGCA ACGCTGCAGA CGGAAAGGAT GCGGCAGGCC
GGCATCGCCC CCGTCACCCT CGGCACGACG AGCGCGATGT ATCTCTATTG GACGCCCGCA
CAGCTTGTGG CTCATCACAC GGTGAATGGA TGTACGCTGG TGGCAGGGGA TCTACTGGGA
ACGGGAACGA TCTCGGGGCC TGACGATGCC AGCCGCGGCA GCCTGATGGA GCTGAGCCGC
GGCGGGCGCG AACCGATCGA CCTGCCGACC GGCGAGCAGC GCACCTTCCT GGAGGACGGT
GATGTCGTCG AGCTGCACGG ATGGGCCGAG GCCGACGGCT TCGCCCGGAT CGGCTTCGGA
CCTTGCGTCG GCAAGGTCGT AGCGGCGACA CGCTAG
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| Protein sequence | MIDETHAASA SSWVEGAAGH REFPVQNLPY GIFTAPGAPP RAGVAIGDHV LGLGAAADLL
DGRARSAAQA VGEEQHLNRL LAEPAESRAA LRQGLFRLLS DRSFEKRVRP LLFRQANCQL
GLPAKIGDYT DFYAGIHHAR AVGALLRPDN PLLPNYKYVP IGYHGRASTV RASGADVVRP
RGQVRAGDTP PALSETRRLD LELELGLWVG GAPNDDGPVP ISAAASRIAG LSLLNDWSAR
DVQAWEYQPL GPFLAKNFLT TVSPWIVTTE ALAPFRVAPT NREPGDPSPL DYLFDRNDQS
LGAYDIRIRA TLQTERMRQA GIAPVTLGTT SAMYLYWTPA QLVAHHTVNG CTLVAGDLLG
TGTISGPDDA SRGSLMELSR GGREPIDLPT GEQRTFLEDG DVVELHGWAE ADGFARIGFG
PCVGKVVAAT R
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