| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1553 |
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| Symbol | |
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| ID | 5198514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1728112 |
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| End bp | 1728750 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640581101 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001262054 |
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| Protein GI | 148554472 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.260138 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACGC AGATTTCCGA GACACCGCGG TCGCGAACCA GCGGACGCCC CAGAAGCGAG
AGCGTGCGGC GCGTCATCCT CTCAGCGGCG ATGGAGCTGC TGAAGGAAGA ATCACTGCAG
GCGATCACCA TCGAGGCGAT CGCCCGCAAG GCCGGCGTCA GCAAGGCGAC GATCTATCGC
TGGTGGTCTT CCAAGGCCTC GGTCGTGATC GAAGCCTTCA TGGAGCACCA TATCATCCGC
ACGCCGATGC GGCACGACCT GCATCCCGTT ACCGCGATCG TGCAGCATTG GCGCTCGCTC
GCCGAACATT ATAGCGGATG GCCCGGGCGC GTCGTCGCTC AGATCCTGGC CGAAGGCCAG
TCCGACCCCG ACGTCCTGCG CGAGTTCAGG CAGCATTTCT ACCACAATCG GCGCGCGCTG
GTGGCGGAGG TTTTCGAGCA GGCCCGCCCC GTCCTGAAAC TCGACGAGCA TGCCGATCTC
GATGAGATTT CCGGGATGCT GTATGCGCCG CTCTACATGA AGCTGATGTG GGGCTATCCG
CCGATCAGCG CTGCCTTCAT CAAGAGCTTC CCGATCACCT ATTTCCGGAC GCTGGGTGTC
GATCTCGACG AGGACGGCAA CGTCACCGAC GGCAAGTAG
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| Protein sequence | MATQISETPR SRTSGRPRSE SVRRVILSAA MELLKEESLQ AITIEAIARK AGVSKATIYR
WWSSKASVVI EAFMEHHIIR TPMRHDLHPV TAIVQHWRSL AEHYSGWPGR VVAQILAEGQ
SDPDVLREFR QHFYHNRRAL VAEVFEQARP VLKLDEHADL DEISGMLYAP LYMKLMWGYP
PISAAFIKSF PITYFRTLGV DLDEDGNVTD GK
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