Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1549 |
Symbol | |
ID | 5197601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1723686 |
End bp | 1724765 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640581097 |
Product | vanillate monooxygenase |
Protein accession | YP_001262050 |
Protein GI | 148554468 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.619122 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0130812 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTTCT TGCGAAACGC CTGGTATGCG GCCGCTTGGA GCTCGGAACT TGCGGATGGT ACGCTCGCGC GCACCTTCCT GGACGAGCCG GTCGTGCTAT TCCGCGGGGA GGACGGCAAG GCCGTCGCCC TGGCCGATAT GTGTCCGCAC CGTTTCGCGC CGCTGAGCCT GGGCCGGATC GGCGGCGACA CTATCCGCTG TCCCTATCAT GGCCTCGTCT TCGACAAGAT GGGGGCTTGC GTCCACAATC CCCATGGGCG CGGCGTCCGC CCCTCGTCGC TGAGCGTGCG GAGCTATCCG GTGCTGGAGC GCGACAGCGT GCTCTGGATC TGGATGGGCG ATGCCGCGCT GGCCGGGGCG ACCCCGCCGC CGTCCTTCGC CTTTCTGGAC AAGGACGGCT GGGCGACGAT CCGCGGGATG CTGGGCGTCG GCGCCAATTA CGAGCTGGTG ACCGACAATC TGATGGACCT CAGCCACGCC GAGTTCCTGC ATCCGTTCAT CGCCCCGGAA GGGAGCGCGG CGGGGATCCG CTACCGTGCC GAGCAGGACG ACGATCGCGT CGCGGCGATC CACGACATGC CCGACCAGCC CAACACCCCG CTGTTCGAGC TCCTGCTCGG CAAGACCGTC ACGCGGATCG ACGGCTATGC GAACACCTAT TGGGAGGCGC CCGCGAACAT GCGGCTGGAG ACCTGCGCGA CGGCGATCGA GCCGGCCGAC GGCGGCAGGG CCGAAATGCT ACAGGCGCAT CTGCTGACGC CCGAGACGGA AACGAGCACG CATTATTTCT GGGCGATCTC GCGCGACCTC TGCCTCGACG ATCAGGAGCT GGAAGCCATG CTCAGGTTCG GGATCGACGC CGCTTTCCGC AATGAGGACG AGCCGATGAT CCAGGCGGTC CAGGGGCGCA TGCGTGGCCG GCCGCTGATG GACATGTCGC CGGCGCTGTT GCCGATGGAC GAGGCGGCCG TGCGCGCGCG CCGGATCCTC GCCCGGCGGA TCGCCGAGGA GCAGAAGGCC AGGGCTGTCG AGGCACGGGA TGAGGGCCAG CCGGCCGCGC ATGCCTGCGC CGCCGAATAG
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Protein sequence | MTFLRNAWYA AAWSSELADG TLARTFLDEP VVLFRGEDGK AVALADMCPH RFAPLSLGRI GGDTIRCPYH GLVFDKMGAC VHNPHGRGVR PSSLSVRSYP VLERDSVLWI WMGDAALAGA TPPPSFAFLD KDGWATIRGM LGVGANYELV TDNLMDLSHA EFLHPFIAPE GSAAGIRYRA EQDDDRVAAI HDMPDQPNTP LFELLLGKTV TRIDGYANTY WEAPANMRLE TCATAIEPAD GGRAEMLQAH LLTPETETST HYFWAISRDL CLDDQELEAM LRFGIDAAFR NEDEPMIQAV QGRMRGRPLM DMSPALLPMD EAAVRARRIL ARRIAEEQKA RAVEARDEGQ PAAHACAAE
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