| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1548 |
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| Symbol | |
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| ID | 5197600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1722761 |
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| End bp | 1723657 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640581096 |
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| Product | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein |
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| Protein accession | YP_001262049 |
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| Protein GI | 148554467 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.40682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00502865 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGAAAG CGATATGGTT TGCGCCGCCG GTCGTGCACC GCGTGGCGGG CCGCGATGGC
CTGCTCGACC GGGCCGATGT GTCGGTCGAC GGCGTTTTGA CGACCTCGTC CGACGAACAG
TTCGACGGGC TGGTCGAGGG GCGTCACGAC TTCGCCGTCA CGGCGATGGA CAACGTCATC
ATGTGGAATC GGCGCCCGGG CGGCGGCGCG CTGCGGATCT TCGCGCAGAT CGAGGCGAGC
ACCAACATCG TCCTGATCGC CCGGCCGCCG TTCGCCGACA TGGCGTCGCT GGCCGGCCGG
AAGCTGCTGG TGGATTCGCC CACCAACGGC TTCGTCGTGC CGCTGCGGGC GATGCTGGCG
GACGCGGGCG TGCCCTTCGA CGCGTGCGAG ATCGTCGAGA GCGGCGGGGT GAAGGAGCGG
CTCGACCGCC TGCTGGCGGG CGAGGGCGAC GCGACGCTTC TCGGGCCGCC GTTCAGCGAT
ATCGCCAGGG CGGCGGGCAT GATCCAGTTG GCCGAGGCCG ACCAGGCGTT TCCGGGCTAT
CCGGGACAGG GGGTGGTCGC CTCGACGCGC CTCGACGGGC GCAAGCGCGA CGAGCTTGCC
CGCTGGCTCG GGGCGATCGA GGCGGCGCGG CAGGCCGCGC GCGCCAATGT CGCGGATGTG
GTGCGCCTGC TGGAATCGCA AGGCGTCCCT GCCGCCGCGG CGGCCGCGCT TGCCAGGGCC
GTGGGGCCGA ACCTGGTCCC GGACCGCCGG GGCGTCGACA TGATCATCGA TCAACGGGTC
CGGCTGGGCC TGCCGGGCAG CGACTGCGGC TATGACGATC TCGTCGATCT GTCCTTGCTC
GCCGCCGCCC CGGACCATCC CGACATGACA GCTTCACCGA AAGGAACTCT CGAATGA
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| Protein sequence | MLKAIWFAPP VVHRVAGRDG LLDRADVSVD GVLTTSSDEQ FDGLVEGRHD FAVTAMDNVI
MWNRRPGGGA LRIFAQIEAS TNIVLIARPP FADMASLAGR KLLVDSPTNG FVVPLRAMLA
DAGVPFDACE IVESGGVKER LDRLLAGEGD ATLLGPPFSD IARAAGMIQL AEADQAFPGY
PGQGVVASTR LDGRKRDELA RWLGAIEAAR QAARANVADV VRLLESQGVP AAAAAALARA
VGPNLVPDRR GVDMIIDQRV RLGLPGSDCG YDDLVDLSLL AAAPDHPDMT ASPKGTLE
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