| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1543 |
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| Symbol | |
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| ID | 5198875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1717567 |
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| End bp | 1718667 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640581091 |
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| Product | vanillate monooxygenase |
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| Protein accession | YP_001262044 |
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| Protein GI | 148554462 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.111008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00152746 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAGCGAAG CCGAGGTTGC GAAGCTATCC GACCGTTTCG AAATATCCCG GCGCAGCGTC
GCGAACGCGG AAAGCGGGTT CATCCTGAAC GCTTGGTATA TCGCCGGCCT GTCCAGCGAT
TTCGACCGGA AGCTCTCGAC GCGCACGATA TGCGGAAAGT CGATCCTGTT CTTCCGCGAC
GCGGACGGCG GCGTCCATGC CATGCAGAAC CGCTGCGGGC ACCGCTCCTA CCCTCTCTCC
GCCGGCACGC TCGACGGCAA TGAGATCGTC TGCGGCTATC ATGGCCTCAG ATACAATGCG
CAGGGCATCT GCGTGCAGCT TCCCGATGGC GGCTGCCCGC GCGGCAGGTT CGGGGTGCGG
AGCTATCCGC TGGTCGAGCG GGCCTCGTTC GTCTGGATCT GGGTCGGCGA TGCCGAACTG
GCCAAGTCCA CGCCCGTGCC GCATCCCGAA TGGCTGGGCG GGGAAGGCTG GTCCTTCGTC
ACCGGCTACA GCCATGCCGA AGGCAGCTAT GTCCATCTGC ACGAGAATCT GCTCGACCTG
TCGCACCTGA CCTATCTGCA TGCGGCGACG TTCGGCACGC CCGAGTTCGC GCTCGCCCCG
ATCGAGACCG AGATCAAGGA TGACGACATC CAGGTCTGGC GGAACGTCGA ATGCCAGTTG
CCGCCGATCT ATTCGATCCC GCTGGGATGG GAAGGCCAGC GCGCGCTGCG AAGGTCCGGG
TCACAGCTCG TTTCGCCCGG CCTCCATGTG AACACCGGCA TTTTCGAGAA TCTCGAACTG
GCCGAGCAGC CCGTGCCGAA GCCGATGGTG AAGGTGGCGC AGCTCATCAC GCCGGAAACC
CAGCATTCGA TTCATTATCA TTATGCGGTG GCCCGCAACT TCGCGCTCGA CGATGACGCC
GTCGGCGATC ATCTGCTCAA GGGATCGCAG GCGGCGTTCA GGGAGGACAT CGAGGCGCTG
CGCCGGATCA CGCAGATGCA CGCCGAGGCG GGCCCCGGGG GCGAAGTGTT CGAGTTCGAC
ATCCCGACCG ACAGGGCGGG GCTCGAGATG CGGCGCCGCT TCAAGAAGTT GATCGATCTC
GAGGAAGCAG CGGACGCCTA G
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| Protein sequence | MSEAEVAKLS DRFEISRRSV ANAESGFILN AWYIAGLSSD FDRKLSTRTI CGKSILFFRD
ADGGVHAMQN RCGHRSYPLS AGTLDGNEIV CGYHGLRYNA QGICVQLPDG GCPRGRFGVR
SYPLVERASF VWIWVGDAEL AKSTPVPHPE WLGGEGWSFV TGYSHAEGSY VHLHENLLDL
SHLTYLHAAT FGTPEFALAP IETEIKDDDI QVWRNVECQL PPIYSIPLGW EGQRALRRSG
SQLVSPGLHV NTGIFENLEL AEQPVPKPMV KVAQLITPET QHSIHYHYAV ARNFALDDDA
VGDHLLKGSQ AAFREDIEAL RRITQMHAEA GPGGEVFEFD IPTDRAGLEM RRRFKKLIDL
EEAADA
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