| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1539 |
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| Symbol | |
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| ID | 5198555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1711586 |
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| End bp | 1713793 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640581087 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001262040 |
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| Protein GI | 148554458 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000217846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00247373 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGGAAAT CGGAAGCGTT ATGCGGTTCG TTGGGCATGG CCCTGCTGGC CGCGTCGTCG
GGCGCCTCAG CACAAGTGTC ACAGACATCG AATATAGATG GCGGGATCGC CGATATCGTC
GTGACCGCGC AACGCCGCGA GGAATCCGCG CAACGTGCGC CGATCATCCT CAACACGCTC
ACCGCCGGCG ACCTGCAGGG CGTGTCCGAC GTGCGCGAGC TGCAATATGC CGTCCCCGGA
ATCCAGTTCG CGAACGCCGG CAACGCGGTG CAGACCTACA TCCGCGGCAT CGGGTCGTTC
AACGCCAAGT CCGTGCAGGA ATCGGCCGTC GCCTACAGCG TCGACGGCGT GTACCTGTTC
ACCACCACCC AGGTCTCGCC GGCGCTTTTC GATCTGACGC GAGTCGAGGT GCTCAAGGGC
CCGCAGGGCA CGCTCTACGG CCGCAACGCC AGCGGCGGCG CCGTCAACAT CATCACGCAG
GGCGCCAAGC TGGGAGAGAT CGAGGGCTTC GTCTCGGGCG AGGCCGGCAA TTACGACCTG
CTGCACCTCA CCGGCGCGGT CAACATCCCC GTCGCGGAGA CCCTGGCCGT CCGATTGGCC
GCCCAGCATG TCCGGCATGA CGGCTATCTG AGCGACGGCA CCAGCGACGA CGACACGACC
GCCGGGCGGC TTCGCGCACT GTGGGAGCCC CGGAGCAACC TGCAGGTGAA GCTCAACGTC
GATATCGCGC GGGTCAGGAC CAAGGGCCCA GGATCGGTCG TCTTCCCGTT CGTCGACCCC
GACCATCCCT GGCGCGGCGC GCTCGACCCC GCTCTCGACA CCGGCCTGTC GCGGGTGAGC
GGGTTTCGTC CGCTGGAGCG CCCCCGCAAC CGGCTCGATC AGTGGAGTGC GAGCGCCGAA
CTCGACTGGG ACTTCGGCTT CGCGACATTC ACATTGCTGC CGGCCTATCG ACACGAGCAT
ATCGACCAGG TCAGCTATGT GCCCGGCTAC GGCACCGCGG AGGACGCGCA CATCAAGCAG
TCCTCGCTCG AAGCGCGGTT GTCGAGGGAC AGCGGCAAGC TGAAGTGGGT CGCCGGCGCC
TATTATCTGG ACGTCGACAT CGCGCAGACC TTCCAGATCA ACAACCCGAC GCCGCCGGTC
GGAAGGCCGG CCGTGAACTT CCTCGACAAT CCGAACAAGC TCGAATCCTG GGCCGTGTTC
GGCGAGGCCA CTTATGAGCT GACCGAGCGC TTCCGCCTGA CCGGCGGCCT GCGCTATACG
TGGGAGCGCT CGATCAGCGG CGGTTTCCAG AACCAGACCT TTCCGGCGCC CCTCGCCACG
CCTGCCTTCC TCCCGGGCAC GGAGCCCGGC GACTTCGTCG TCGACGAGCG CGTGACCGAC
GACGCGATCA CCTGGAAGGT CGGCGCGCAA TATGACATCG CGGCCGAGTC CACCATCTTC
GCAACGGTCA GCCGCGGCTT CAAGGGCGGC GGTTCCTATG TCGACGCCGC GAGCGTCGAT
CCGACGTTCG AGCCCGAAAC GGTGGTCGCC TACGAGTTCG GGTCGCGCAA CCGCTTCTTC
GACAACAAGC TTCAGGTGAA CCTGGAAGCG TTCTGGTGGG ACATCAAGAA CCAGCAGATC
GCGTTTCTCG GCTTCAACTC GCTGAACCAG CCGAAATTCC AGACGGTCAA TGCCGCGAAC
GCCAAGGCCT ATGGCGGAAG CGTCGACCTG GTCTGGCGCG CGACCCGCAA CGACACGCTC
CGCTTCTCCA CCGAATTCGT GAAGTCGGAT TACAGCAACT TCGTCCGGGT CCAGCCGGCA
GCGCCGATCG GGACGCGTTG CGCCACCGCG CCGCTCGCGG GCCGCGTCGC CATCGACTGC
TCCGGTTTCC CGATGATGCG GACGCCCAAA TGGGCCGGCT CGGCGGGTTA CGAACACCGC
ATCCCCCTCG CCGGCGGCGC CAAGGTGACG CTGGCCGGCG ACATGACCTT TGCCTCGTCG
CGCTTCACCT CGATCGACTT CAGTCCGGTG ACGCGCGACA AGGGATATGC GGTGTTCAAT
GCCGAAGCGG CCTATCATGC GCCCGACGAT CGCTGGTCGC TCAGCCTTTT CGGCCAGAAC
CTGACCCGCA CCGCCTTCCT GACCGGCGGC CTCCAGTCCG GGACCATCAA CCGCCCCACG
ATCAACCAGC CGCGAACCTA TGGGCTCAGG GCCCGCATGA ACTTCTAG
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| Protein sequence | MRKSEALCGS LGMALLAASS GASAQVSQTS NIDGGIADIV VTAQRREESA QRAPIILNTL
TAGDLQGVSD VRELQYAVPG IQFANAGNAV QTYIRGIGSF NAKSVQESAV AYSVDGVYLF
TTTQVSPALF DLTRVEVLKG PQGTLYGRNA SGGAVNIITQ GAKLGEIEGF VSGEAGNYDL
LHLTGAVNIP VAETLAVRLA AQHVRHDGYL SDGTSDDDTT AGRLRALWEP RSNLQVKLNV
DIARVRTKGP GSVVFPFVDP DHPWRGALDP ALDTGLSRVS GFRPLERPRN RLDQWSASAE
LDWDFGFATF TLLPAYRHEH IDQVSYVPGY GTAEDAHIKQ SSLEARLSRD SGKLKWVAGA
YYLDVDIAQT FQINNPTPPV GRPAVNFLDN PNKLESWAVF GEATYELTER FRLTGGLRYT
WERSISGGFQ NQTFPAPLAT PAFLPGTEPG DFVVDERVTD DAITWKVGAQ YDIAAESTIF
ATVSRGFKGG GSYVDAASVD PTFEPETVVA YEFGSRNRFF DNKLQVNLEA FWWDIKNQQI
AFLGFNSLNQ PKFQTVNAAN AKAYGGSVDL VWRATRNDTL RFSTEFVKSD YSNFVRVQPA
APIGTRCATA PLAGRVAIDC SGFPMMRTPK WAGSAGYEHR IPLAGGAKVT LAGDMTFASS
RFTSIDFSPV TRDKGYAVFN AEAAYHAPDD RWSLSLFGQN LTRTAFLTGG LQSGTINRPT
INQPRTYGLR ARMNF
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