| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1533 |
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| Symbol | |
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| ID | 5196194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1702741 |
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| End bp | 1703733 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640581081 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001262034 |
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| Protein GI | 148554452 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00655732 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCGTGG GGGACGATCG ACAGTCGGAA ATCGTGCACA ACGATGCGGC CACGGCGTCG
GCCTATATGC GCGATCAATT GGCGCCGCAC CGATTGCGGG CCGGCGTCGG GCCGTTCGAT
GCCCGCTTCC GTTCCATCCA TATCGGGTCG GCCGTCCTGC TCGATATCGC CTATGGCACC
GACGTCGAGA TCGAGGCCGA GGCCTATAAG GATCTCTACT TCGTCCATGC CGCGACATCG
GGCCGCGGCG TCGCGGAAGC CGGCTCGAAG AGCTATGAGA TACGGCCCGC GAACCTCCTG
ATCAGCGATC CCGGGCAGCA GGCCCGGGTG CGGTGGGACC GGGAGAGCCG GCATAGGACG
CTGCGCATCA AGCGCGACGT CATCGAGGAC CGGCTTCGCG AGCTTCTCAA CAAGAACCTG
CACGATCCGA TCACCTTCGA ACCCAACGTC TCCGACGATC TTCCGCTGAC CGCCATGTGG
CGGTCGACCA TCTCCTACGT CTATCAGCAG GTCGTCGATT TCCCCGAGCT TTCGAGCGCG
GCCCATATGG GGCGGATGTA TCTCAACATC CTGGTGGATA TGCTGCTCCT CAACCAGGAG
CATAATTATT CCGACGATAT CCGCGACCTG ACCGGGGCGG TGCATCCCTG GCATGTCCGG
AAGGCCAAGC AATATATCGA CCAGTTGATC GAGGCCGGCT CCTTCGATGA CGAGGAACTC
CGGATCGAGG CGATCGCCGA ATATACCGGC ATCAGCACCA GGACGCTCCA GGCGTCGTTC
GCGCGCTTCG TCGGGGATAC GCCGCTCAAA TATATCCGCC ACCGCAAGAT CGAGCGGCTT
CACCTGGCCC TGCAGAATGC TCCGACGAGC AAGCGCGTGA CCGATGTCAT GACCGATTTG
GGGATCAACA ACTTCGGGCG CTATTCGGGC TATTACAAGC GCCGTTACGG AACCTCGCCC
TCGTCGACCC TGCGCGACCG CCTGCTGAGC TGA
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| Protein sequence | MAVGDDRQSE IVHNDAATAS AYMRDQLAPH RLRAGVGPFD ARFRSIHIGS AVLLDIAYGT
DVEIEAEAYK DLYFVHAATS GRGVAEAGSK SYEIRPANLL ISDPGQQARV RWDRESRHRT
LRIKRDVIED RLRELLNKNL HDPITFEPNV SDDLPLTAMW RSTISYVYQQ VVDFPELSSA
AHMGRMYLNI LVDMLLLNQE HNYSDDIRDL TGAVHPWHVR KAKQYIDQLI EAGSFDDEEL
RIEAIAEYTG ISTRTLQASF ARFVGDTPLK YIRHRKIERL HLALQNAPTS KRVTDVMTDL
GINNFGRYSG YYKRRYGTSP SSTLRDRLLS
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