Gene Swit_1517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1517 
Symbol 
ID5196978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1681889 
End bp1682155 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content67% 
IMG OID640581064 
Producthypothetical protein 
Protein accessionYP_001262018 
Protein GI148554436 
COG category[S] Function unknown 
COG ID[COG2938] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCACG ACGACCGCCT GAAACGCCTG CGCTTCCGCG CCTGGCACCG GGGAACCCGC 
GAGGCCGACT ATATGATCGG CGGCTTCTTC GACCGCCTTC ACCAGGGCTG GGACGGCGAA
GCCCTCGACT GGTTCGAGGG GCTGCTCGCG CAGGAGGACG CCGACATCCT CGGCTGGGTG
ATGGGCACCA TCCCGGTCCC GGCCGAATGG CAGGGCGCGC TGATGGAGCG GATGCAGCGG
ATCGATTATG TCGACATTCC GCGGTGA
 
Protein sequence
MNHDDRLKRL RFRAWHRGTR EADYMIGGFF DRLHQGWDGE ALDWFEGLLA QEDADILGWV 
MGTIPVPAEW QGALMERMQR IDYVDIPR