| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1516 |
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| Symbol | |
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| ID | 5196977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1679698 |
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| End bp | 1681758 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640581063 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001262017 |
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| Protein GI | 148554435 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1200] RecG-like helicase |
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| TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCCCG ATATACTCAA TCCGTTGTTC GCCGAGGTCG AGGCGCTGAA GGGCGTCGGG
CCGACGCTCG CCAAGCCGCT GCGCAAGCTG GAGCTCGAAC GGGTCGTCGA CCTGCTCTTC
CATCTTCCCA CCGGATCGAT CGACCGCAAG CCGGTCGACA CGGTCGAGGC CGAGGACGCC
GGCCGGATCG TCACCGTCCG GCTGGTGCCG ACCAGCTATC GCGCGTCCGG CGGGCGCGGG
CCGTTCCGGG TCGGCGCGAC CGACCAGGCG GGCAACGTCG TCAGCCTCGT CTATTTCGGC
GGCAATCCCG GCTGGGCGAA GAAGCTGCTG CCGATCGGCG AGCCGCGCAT CGTCTCGGGC
CGGCTGGATC TCTACGGGCA GGAGCTCCAG ATCGTCCATC CCGATCATGT CCTGTCCCCG
GCCGAGGCGG CCGACCTGCC GACCCGCGAG AGCGTCTATC CGCTGTCGGA GGGGATCACC
TCGCGGCGGC TCGGCCAGCT CATCGAGCAG GGGATCGAAC GCGCGCCCGA GCTGCCTGAA
TGGATCGAGC CGAGCCTGCT CCAGGCGCGC GGCTGGCCGT CCTGGCATGA CGCGGTCGTC
CGCGCCCATG CCGACGCGCA GGACGAACCG GCGCGCGCGC GGCTCGCCTA TGACGAGCTG
TTCGCCAACC AGCTCGCGCT GATGCTGGTG CGCGCCTCCT CGCGCAAGCG GCGCGGCCTG
CCGCTCAAGG GCGACGGCCG GCTGCGCGAC CAGCTCAAGC TTCCCTATGC CCCGACCGGC
GCGCAGAGCC GCGCGGTGGC CGAGATCGAG GGCGACCTCG TCCAGCCGGC GCCGATGACC
CGCCTGCTCC AGGGCGACGT CGGCTCGGGC AAGACGCTGG TCGCGACGAT GGCGCTGCTC
TGCGCGGTCG AGGCGGGGGC GCAGGGCGCG CTGCTGGCGC CGACCGAGAT CCTCGCCCGC
CAGCATTTCG AGACGCTGGG CCGCACCCTC GCCGGCCTGC CCGTCAACGT CGCGATCCTG
ACGGGGCGGG AAAAGGGCAA GGCGCGCGAG GCGACGCTGA TGGCGCTGGC CGACGGATCG
ATCGACATCC TCGTCGGCAC CCATGCGATC TTCCAGGAGA AGGTCGGCTA CCGCAAGCTC
GGCCTCGCCG TGGTCGACGA GCAGCATCGC TTCGGCGTCG CCCAGCGGAT GATGCTCCAG
GCCAAGGCCG AGCGGCCGCC GCACCTGCTG GTGATGACGG CGACCCCGAT CCCGCGCACC
CTGACGCTCA GCCATTATGG CGAGATGGAC GTCAGCCGCT TGGACGAGAT GCCGCCGGGC
CGCCAGCCGA TCGAGACGCG GGTGATCTCG GGCGAGCGGC TCGACGAGGT CGCGCAGGCG
CTCGGCCGCC ACCTCGCCGC GGGCCGCCAG GCCTATTGGG TCTGCCCGCT GGTCGAGGAG
AGCGAGCAGT CCGACCTCGC CGCCGCCGAG GGGCGGGCGG AGAGCCTGCG GCAATGGTTC
GGCGACAAGG TCGGCGTCGT CCATGGCCGG ATGAAGGGGC CCGAGAAGGA CGCGGTGATG
GCCGAGTTCC AGGCGGGCCG GATCGGCGTG CTGGTCGCGA CGACGGTGAT CGAGGTCGGC
GTTGACGTCC CCAACGCGAC GCTGATGATC ATCGAGGGCG CGGATCGCTT CGGTCTCGCC
CAGCTCCACC AGCTGCGCGG CCGGGTGGGG CGCGGCGACC AGCGATCGGT CTGCCTGCTG
CTGCGCGGCA ACGCCCTGTC TGAGACCTCG CGCGCGCGGC TGGCGCTGAT GCGCGAGACC
AATGACGGCT TCCGCATCGC CGAGGAGGAT CTGCGCCTGC GCGGCGCGGG CGAGATATTG
GGGACCCGCC AGTCGGGCGA GGCGGCCTTC CGTCTCGCCG GTCCCGAGCG GACCGCCGCG
CTGATCGAGG CGGCGACCCA GGACGCCCGC CTGCTGGTCG ACCGCGACGG CGGTCTCGAC
AGCGAGCGCG GACAGGCGGC GCGGATCGCC CTCTATCTGT TCGAACGCGA CGCCGCCGTG
GGATTGCTGC GGGCGGGCTA A
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| Protein sequence | MRPDILNPLF AEVEALKGVG PTLAKPLRKL ELERVVDLLF HLPTGSIDRK PVDTVEAEDA
GRIVTVRLVP TSYRASGGRG PFRVGATDQA GNVVSLVYFG GNPGWAKKLL PIGEPRIVSG
RLDLYGQELQ IVHPDHVLSP AEAADLPTRE SVYPLSEGIT SRRLGQLIEQ GIERAPELPE
WIEPSLLQAR GWPSWHDAVV RAHADAQDEP ARARLAYDEL FANQLALMLV RASSRKRRGL
PLKGDGRLRD QLKLPYAPTG AQSRAVAEIE GDLVQPAPMT RLLQGDVGSG KTLVATMALL
CAVEAGAQGA LLAPTEILAR QHFETLGRTL AGLPVNVAIL TGREKGKARE ATLMALADGS
IDILVGTHAI FQEKVGYRKL GLAVVDEQHR FGVAQRMMLQ AKAERPPHLL VMTATPIPRT
LTLSHYGEMD VSRLDEMPPG RQPIETRVIS GERLDEVAQA LGRHLAAGRQ AYWVCPLVEE
SEQSDLAAAE GRAESLRQWF GDKVGVVHGR MKGPEKDAVM AEFQAGRIGV LVATTVIEVG
VDVPNATLMI IEGADRFGLA QLHQLRGRVG RGDQRSVCLL LRGNALSETS RARLALMRET
NDGFRIAEED LRLRGAGEIL GTRQSGEAAF RLAGPERTAA LIEAATQDAR LLVDRDGGLD
SERGQAARIA LYLFERDAAV GLLRAG
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