Gene Swit_1512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1512 
SymbolanmK 
ID5197670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1675304 
End bp1676401 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content73% 
IMG OID640581059 
Productanhydro-N-acetylmuramic acid kinase 
Protein accessionYP_001262013 
Protein GI148554431 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2377] Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAGA TGCTGGCCGT GGGGCTGATG TCGGGCACGT CGCTCGACGG GATCGATGCC 
GCGCTGATCG AGACCGACGG GGCGGGGCAT ATCCGGCCGA TCGCCTTCCG CTCCGATCCC
TATGCCGCCC AGGCGCGCGA GCAGTTGCGC GAAGCGGCGG CGCTGGCGCT GAGCTTCGAC
GCGCCGCGCC CGAGCCCGAA GATCGCCGCG GCCGAGGCGA TGCTGACCGA TCGCCACGTC
GCGGCGGTGC GGCAGCTCCT GGCGGCGGCG CGGGTCGAGG CGGGGCAGGT CGACGTGATC
GGCTTCCACG GGCAGACGAT CGCCCACCGC CCCGATCGCG GCTGGACCTG GCAGATCGGC
GACGGCGCCG CGATGGCGCG TGCGCTCGGC ATCAGGGTGG TCAACGACCT GCGCTCGGCC
GACGTCGCCG CGGGCGGGCA GGGGGCGCCG CTGCTGCCGG TCTATCACCG CGCGCTGACC
GCCGGGATGG AGGGGCCGGT CGCGGTGCTC AACCTCGGCG GGGTCGCCAA CATCACCTGG
CTGGGCGCGG GCGAGGGCGA GCTGATCGCC TTCGACACCG GCCCCGCCAA CGGCCTGATC
GACGACTGGA TGCTGCAGGA GACCGGATCG CCCTATGACG CGCACGGCGC CTTCGCCGCG
CGCGGCACTG TCGATCGCGC GGTGCTCGGG GCGATGCTCG ACAATGACTG GTTCGACGCG
CCGCCGCCCA AGTCGCTCGA CCGCGCCGAC TTCACCATCC AGCCCGCGCG CGGCCTCTCC
GCCGCCGACG GCGCCGCGAC CCTGACCGCC TTCACCGCCG AGACGGTGGC GCTCGCGCTG
CGCCACCTGC CGGCGCCGCC CCGCCGGCTG ATCGTCGCGG GCGGCGGGCG GCACAATCCG
ACCCTGATGA AAATGATAGC GACCGCTACA AAAATAACCC CCGAGCCGAT CGAGGCGCTC
GGCTGGAACG GCGACGCGAC CGAGGCGGAG GGTTTCGCCT ATATGGCGGT GCGCTCGCTG
AAAGGGCAGG CGATCAGCTT CCCCGGTACG ACCGGGGTGG CGGAGCCGCT GACGGGCGGG
GTGACGCACC GGCCCTGA
 
Protein sequence
MTKMLAVGLM SGTSLDGIDA ALIETDGAGH IRPIAFRSDP YAAQAREQLR EAAALALSFD 
APRPSPKIAA AEAMLTDRHV AAVRQLLAAA RVEAGQVDVI GFHGQTIAHR PDRGWTWQIG
DGAAMARALG IRVVNDLRSA DVAAGGQGAP LLPVYHRALT AGMEGPVAVL NLGGVANITW
LGAGEGELIA FDTGPANGLI DDWMLQETGS PYDAHGAFAA RGTVDRAVLG AMLDNDWFDA
PPPKSLDRAD FTIQPARGLS AADGAATLTA FTAETVALAL RHLPAPPRRL IVAGGGRHNP
TLMKMIATAT KITPEPIEAL GWNGDATEAE GFAYMAVRSL KGQAISFPGT TGVAEPLTGG
VTHRP