Gene Swit_1511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1511 
Symbol 
ID5197669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1674019 
End bp1675194 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content64% 
IMG OID640581058 
Producthypothetical protein 
Protein accessionYP_001262012 
Protein GI148554430 
COG category[S] Function unknown 
COG ID[COG3825] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTCG GCTTCCTCGA CGAGCTTCGC GCCGCCGGCA TCCCCGCCAG CCTCAAGGAG 
CATCTGACCC TGCTCGAGGC GATGGACCGC GACGTGATCG GCTGGTCGCC CGAGGAATTC
TATTATCTCG CCCGCGCCAC CTATGTGAAG GACGAGGGCC TGCTCGACCG CTTCGACCGG
GTGTTCGGCA AGGTGTTCCG CGGCGTGCTC GACCAGGCCG GCGAAGGGCA TGAGATCCCG
GAGGACTGGC TGAAGGCGAT CGCCCAGAAA TTCCTGAGCC CCGAGGAGAT GGCGAAGATC
GAGGCGCTCG GCTCCTGGGA CGAGATCATG GAGACGCTCA AGAAGCGGCT CGAGGAGCAG
CAGGGCAAGC ACCAGGGCGG CAACAAGTGG ATCGGCACCG GCGGCACCTC GCCCTTCGGC
AATTCGGGCT ATAATCCCGA AGGCGTGCGG ATCGGCGGGC AGAGCGTCCA CAAGCGCGCG
ATCAAGGTGT GGGAGAAGCG CGAGTATAAG AATCTCGACA ACGACGTCGA GCTGGGCACC
CGCAACATCA AGGTGGCGCT GCGCCGCCTG CGCCGCTTCG CGCGCGAGGG GGCGGCGGAC
GAGCTCGACC TCGACGGCAC GATCGACGGC ACCGCGCGGC GCGGCTTCCT CGACATCCAC
ATGCGGCCCG AGCGGCGCAA CGCGGTCAAG CTGCTGCTCT TCCTCGACAT CGGCGGATCG
ATGGACCCGC ACGTCAAGCT GTGCGAGGAG CTGTTCTCGG CCGCGACGGC CGAGTTCAAG
CATCTCGAAT TCTTCTACTT CCACAACTGC ATCTACGAAG GCGTGTGGAA GGACAATCGC
CGCCGCTTCC AGGAGCGCAC GCCGACCTGG GACATCCTCC ACAAATATGG CCACGATTAT
AAGCTGGTGA TCGTCGGCGA CGCGTCGATG AGCCCCTATG AGATCGCCCA GCCGGGCGGA
TCGGTCGAGC ATTTCAACGA GGAGGCGGGC GAGGTCTGGC TGAAGCGGAT GCTCAACGTC
TACGCCTCTG CGGTGTGGCT GAACCCGACG CCCGAGGCCT ATTGGATGCA TACCCAGTCG
ACCCGCATGA TCCGCGAGAT CATGCACAAC CGCATGTTCG GCCTGACCCT GTCCGGGCTG
GAGGACGCGA TGCGGAGCCT GGCGCGGAAG AAATAG
 
Protein sequence
MFFGFLDELR AAGIPASLKE HLTLLEAMDR DVIGWSPEEF YYLARATYVK DEGLLDRFDR 
VFGKVFRGVL DQAGEGHEIP EDWLKAIAQK FLSPEEMAKI EALGSWDEIM ETLKKRLEEQ
QGKHQGGNKW IGTGGTSPFG NSGYNPEGVR IGGQSVHKRA IKVWEKREYK NLDNDVELGT
RNIKVALRRL RRFAREGAAD ELDLDGTIDG TARRGFLDIH MRPERRNAVK LLLFLDIGGS
MDPHVKLCEE LFSAATAEFK HLEFFYFHNC IYEGVWKDNR RRFQERTPTW DILHKYGHDY
KLVIVGDASM SPYEIAQPGG SVEHFNEEAG EVWLKRMLNV YASAVWLNPT PEAYWMHTQS
TRMIREIMHN RMFGLTLSGL EDAMRSLARK K