| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1504 |
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| Symbol | |
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| ID | 5197453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1666597 |
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| End bp | 1668558 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640581051 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_001262005 |
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| Protein GI | 148554423 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.680093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTTT CTGGCAGCAG CGAAGTGAGC GCGAGCGACG TGGCGACAAC GATGGATTCC
CCGGCGAAGG ACGCCAAGGC GGCGAAGCCC GCGGCCGCGC CCGAGGCGGA AGCCAAGGCC
GCCGCCCCGG CCAAGGCCCG CGTGTCGACC GGCAGCACGG AGATTCGCCC GCAGCTCTAC
CCGATCGAGG TGGACCATAG CCGCGACGCG CTGCTCACCG ACTTCGGCAA GGAGACGCTG
ACCGACCGTT ACCTGCTGCC GGGCGAGAGC TACCAGGACC TGTTCGTGCG CGTCGCATCG
GCCTATGCCG ACGACCAGCC GCACGCCCAG CGCCTCTACG ACTATATCTC GAAGCTGTGG
TTCATGCCGG CCACCCCGGT GCTGTCGAAC GGCGGCACGG GCCGCGGCCT GCCGATCAGC
TGCTATCTCA ACTCGGTCGA CGACAGCCTG GAGGGCATCG TCAACACCTG GAACGAGAAT
GTCTGGCTGG CCTCGCGCGG CGGCGGCATC GGCACCTACT GGGGCTCGGT GCGCGGCATC
GGCGAGCCGG TCGGCCTCAA CGGCAAGACC TCGGGCATCA TCCCCTTCGT CCGCGTGATG
GACTCGCTGA CCCTCGCGAT CAGCCAGGGC TCGCTGCGCC GCGGCTCGGC CGCCGTCTAT
CTCGACGTCT CGCACCCGGA GATCGAGGAG TTCCTCGAGA TCCGCAAGCC TTCGGGCGAC
TTCAACCGCA AGGCGCTCAA CCTGCACCAT GGCGTGCTGC TGACCGACGC CTTCATGGAA
GCGGTCCGCG ACGGCGCCGA ATGGGATCTG GTCAGCCCGA AGGACGGATC GAAGCGCAGC
TCGGTCGACG CCCGCGCGCT GTTCCAGAAG CTGGTCGAGA CCCGCCTCGC CACCGGTGAG
CCCTATATCG TGTTCAACGA CACGGTGAAC CGGATGATGC CGAAGCATCA CCGCGACGTC
GGGCTGAAGG TGTCGACCTC GAACCTCTGC TCGGAGATCA CCCTGCCGAC CGGGCGCGAC
CAGCACGGCA TGGACCGCAC CGCGGTCTGC TGCCTGAGCT CGCTCAACCT CGAGACCTGG
GACGAGTGGA ACGGCGACAA GCGCTTCGTC GAGGACGTGA TGCGCTTCCT CGACAATGTG
CTGCAGGACT ATATCGACCG CGCGCCGGAC GAGATGGCGC GCGCCAAGTA CAGCGCCAGC
CGCGAGCGTT CGGTGGGCCT GGGCGTGATG GGCTTCCACA GCTTCCTCCA GGCGCGCGGC
CTGCCCTTCG AGGGCGCGAT GGCGAAGAGC TGGAACCTGC GCATCTTCAA GCATATCGCC
GCCGCCGCCG CCGAGGCCTC GATGCTGCTG GCCAGCGAGC GCGGGCCGTG CCCCGACGCC
GCCGACCTGG GCGTGATGGA GCGCTTCAGC TGCAAGATGG CGATCGCGCC GACCGCGTCG
ATCTCGATCA TCTGCGGCGG CACCAGCGCC TGCATCGAGC CGATCCCGGC CAACATCTAC
ACCCACAAGA CGCTGTCGGG CAGCTTCTCG ATCAAGAATC CCTATCTGCA GAAGCTGCTC
GCCGAGAAGT CGAAGGACAG CGACGCGGTG TGGAACTCGA TCCTCGAAAA GGGCGGATCG
GTCCAGCATC TCGACTTCCT GACCCAGGAC GAGAAGGACG TGTACAAGAC CAGCTTCGAG
ATCGACCAGC GCTGGCTGAT CGAACTCGCG GCGGACCGCA CGCCCTATAT CGACCAGGCG
CAGTCGCTGA ACCTGTTCAT CCCGGCCGAC GTCGAGAAGT GGGACCTGCT GATGCTCCAC
TTCCGCGCCT GGGAGCTGGG CATCAAGTCG CTCTACTATC TCCGCTCCAA GTCGGTGCAG
CGCGCCGGCT TCGCGGGCGG GGTCGAGGCG GACAACACCC CCGACCTCAA GCAGATCGAG
CTTGAGACCA AGGATTATGA CGAATGCCTG GCCTGCCAAT AG
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| Protein sequence | MDLSGSSEVS ASDVATTMDS PAKDAKAAKP AAAPEAEAKA AAPAKARVST GSTEIRPQLY
PIEVDHSRDA LLTDFGKETL TDRYLLPGES YQDLFVRVAS AYADDQPHAQ RLYDYISKLW
FMPATPVLSN GGTGRGLPIS CYLNSVDDSL EGIVNTWNEN VWLASRGGGI GTYWGSVRGI
GEPVGLNGKT SGIIPFVRVM DSLTLAISQG SLRRGSAAVY LDVSHPEIEE FLEIRKPSGD
FNRKALNLHH GVLLTDAFME AVRDGAEWDL VSPKDGSKRS SVDARALFQK LVETRLATGE
PYIVFNDTVN RMMPKHHRDV GLKVSTSNLC SEITLPTGRD QHGMDRTAVC CLSSLNLETW
DEWNGDKRFV EDVMRFLDNV LQDYIDRAPD EMARAKYSAS RERSVGLGVM GFHSFLQARG
LPFEGAMAKS WNLRIFKHIA AAAAEASMLL ASERGPCPDA ADLGVMERFS CKMAIAPTAS
ISIICGGTSA CIEPIPANIY THKTLSGSFS IKNPYLQKLL AEKSKDSDAV WNSILEKGGS
VQHLDFLTQD EKDVYKTSFE IDQRWLIELA ADRTPYIDQA QSLNLFIPAD VEKWDLLMLH
FRAWELGIKS LYYLRSKSVQ RAGFAGGVEA DNTPDLKQIE LETKDYDECL ACQ
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