| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1473 |
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| Symbol | |
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| ID | 5197223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1622964 |
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| End bp | 1625807 |
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| Gene Length | 2844 bp |
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| Protein Length | 947 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640581021 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001261975 |
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| Protein GI | 148554393 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0442327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTGGA TCGGCGAAAT CGACCTCGGC ACCAAGGCGG TGCCGGTGAC CGGCCCGATG
GTGGCGCTGA CCATCGACGA CCAGCGGGTC GAGGTGCCCG AGGGCACGTC GATCATGCGC
GCGGCGGCGC TGATGGGGAC GACCATCCCC AAGCTGTGCG CGACCGACAT GCTCGAAAGC
TTCGGCTCGT GCCGGCTCTG CCTGGTCGAG ATCGACGGGC GGGCGGGCTA CCCCGCCTCC
TGCACCACGC CGGTGGCGCC GGGCATGGTG GTCCGCACCC AGACCGCCAA GCTCCAGGAA
CTGCGGCGCG GGGTGATGGA ACTCTACATC TCCGACCATC CGCTCGACTG CCTGACCTGC
TCGGCCAATG GCGATTGCGA GTTGCAGGAC ATGGCCGGCG CGGTCGGCCT GCGCGAGGTG
CGCTACGGCT ATGAGGGGGA GAACCACCTC GTCGCCGAGA AGGACGAGTC CAACCCCTAT
TTCACCTTCG ACAGCACCAA GTGCATCGTC TGCTCGCGCT GCGTGCGCGC CTGCGACGAG
GTGCAGGGGA CGCTGGCGCT GACCGTCGAC GGGCGCGGCT TCCAGTCGCA CATCGCCGCC
AGCCAGGATC AGGATTTCCT CTCCTCCGAA TGCGTGAGCT GCGGCGCCTG CGTCCAGGCC
TGCCCGACCT CGGCGCTGAT CGAGAAGTCG GTGATCGAGA AGGGCACCCC CGACCGCGCC
GTCGTCACCA CCTGCGCCTA TTGCGGGGTC GGTTGCGCCT TCCGCGCCGA GCTGCGCGGC
GAGGAACTGG TGCGGATGGT GCCGTGGAAG GACGGCAAGG CCAATCGCGG GCATAGCTGC
GTCAAGGGCC GCTTCGCCTG GGGCTATGCC CAGCATCGCG AGCGCATCCT GAAGCCGATG
GTCCGCGCCT CGGTCGACCA GCCCTGGCGC GAGGTGGGCT GGGACGAGGC GATCGCCCAT
GTCGCGTCCG AGTTCCGCCG CATCCAGGCG ACCTACGGCA CCCGTTCGGT CGGCGGCATC
ACCTCCAGCC GCTGCACGAA CGAGGAGACC TTCCTCGTCC AGAAGCTGAT CCGGCAGGGC
TTCGGCAACA ACAATGTCGA TACCTGCGCG CGGGTCTGCC ATTCGCCGAC CGGCTATGGG
CTGAAGACGA CCTTCGGCAC ATCGGCCGGC ACCCAGGATT TCGACAGCGT CCAGCAGGCG
GACGTGATCA TGGTGATCGG CGCCAACCCG ACCGACGGCC ACCCGGTCTT CGCCAGCCGG
ATGAAACGGC GGCTGCGGGA AGGCGCGCGG CTGATCGTCG TCGATCCGCG CCGCACCGAT
CTGGTGCGCA GCGCGCGCAT CGCCGCCGAT CATCACCTGC CGCTCAAGCC GGGCACCAAC
GTCGCGGTGC TGACCGCGAT GGCGCATGTC ATCGTCGAGG AAGAGCTGGC GGACGAGGCC
TATATCCGCG AGCGTTGCGA CTGGGACGAG TATCAGGACT GGGCGGCGTT CGTGGCCGAG
CCGCATCGCT CGCCCGAGGC GACCGAGGCG CTGACCGGCG TTCCGGCCGC CGAGCTGCGC
GCCGCCGCCC GGCTCTATGC GACCGGCGGC AATGGCGCGA TCTATTACGG CCTCGGCGTC
ACCGAGCACA GCCAGGGATC GTCGACGGTG ATGGCGATCG CCAACCTCGC CATGGCGACC
GGCAATATCG GCCGCGAGGG CGTGGGCGTG AATCCGCTGC GCGGACAGAA TAACGTCCAG
GGCTCGTGCG ACATGGGCAG CTTCCCGCAC GAATATTCGG GCTATCGCCA CGTCTCCGAC
CCGGAGACGC GGGCGCTGTT CGAGACGGCA TGGGGCGTGC CGCTCGATCC CGAGCCGGGC
CTGCGGATCA ACAACATGCT CGACGCCGCG ACCGACGGCG TCTTCAAGGG CCTTTTCATC
CAGGGCGAGG ACATCCTCCA GTCCGATCCC AACACGACCC ATGTCGCCGC GGGCCTCGCC
GCGATGGAAT GCGTGGTGGT GCAGGACCTG TTCCTCAACG AGACCGCCAA CTACGCCCAT
GTCTTCCTGC CGGGCTCGAC CTTCCTGGAG AAGGACGGGA CCTTCACCAA TGCCGAGCGC
CGCATCCAGC TCGTCCGCAA GGTGATGGCG CCGCTCAACG GCCATGCTGA CTGGGAGATC
GTCCAGCTCG TCGCCAGGGC GATGGGGCTC GACTGGACCT ACGACCACCC GTCCGAGATC
ATGGACGAGA TCGCCCGCCT TACGCCGAGC TTCGCCGGAG TCAGCTTCGA CCTGATCGCG
AAGTATGGGT CGATCCAGTG GCCCGCCAAC GAGAAGGCCC CGCTCGGCAC GCCGACGATG
CACATCGGCG GCTTCGCGCG CGGCAAGGGC AAGTTCGTGG TCACCGACTA TGTCGCGACC
GACGAGAAGA CCGGCCCGCG CTATCCGCTG CTGCTGACCA CCGGTCGCAT CCTCAGCCAT
TACAATGTCG GCGCGCAGAC GCGGCGCACC GCCAATGTCG CCTGGCATCC CGAGGACCTG
CTGGAGATAC ACCCGCTCGA CGCCGAGAAT CGCGGCATCA AGGATCGCGA CTGGGTCTAT
CTGCGCAGCC GCGCGGGCGA GACGACGCTG CGCGCTTCGG TGACCGAGCG GGTGGCGCCC
GGCGTGGTCT ACACCACCTT CCACCATCCG GTGACGCAGG CCAATGTCAT CACCACCGAC
TATTCCGACT GGGCGACCAA CTGTCCGGAG TACAAGGTCA CGGCCGTGCA GGTCGGCCTG
TCCAACGGCC CCTCCGAATG GCAGGAGGAT TATAGCGAAC AGGCGCGGCA GAGCCGCCGC
ATCCTCGTCG AGGCCGCCGA ATGA
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| Protein sequence | MAWIGEIDLG TKAVPVTGPM VALTIDDQRV EVPEGTSIMR AAALMGTTIP KLCATDMLES
FGSCRLCLVE IDGRAGYPAS CTTPVAPGMV VRTQTAKLQE LRRGVMELYI SDHPLDCLTC
SANGDCELQD MAGAVGLREV RYGYEGENHL VAEKDESNPY FTFDSTKCIV CSRCVRACDE
VQGTLALTVD GRGFQSHIAA SQDQDFLSSE CVSCGACVQA CPTSALIEKS VIEKGTPDRA
VVTTCAYCGV GCAFRAELRG EELVRMVPWK DGKANRGHSC VKGRFAWGYA QHRERILKPM
VRASVDQPWR EVGWDEAIAH VASEFRRIQA TYGTRSVGGI TSSRCTNEET FLVQKLIRQG
FGNNNVDTCA RVCHSPTGYG LKTTFGTSAG TQDFDSVQQA DVIMVIGANP TDGHPVFASR
MKRRLREGAR LIVVDPRRTD LVRSARIAAD HHLPLKPGTN VAVLTAMAHV IVEEELADEA
YIRERCDWDE YQDWAAFVAE PHRSPEATEA LTGVPAAELR AAARLYATGG NGAIYYGLGV
TEHSQGSSTV MAIANLAMAT GNIGREGVGV NPLRGQNNVQ GSCDMGSFPH EYSGYRHVSD
PETRALFETA WGVPLDPEPG LRINNMLDAA TDGVFKGLFI QGEDILQSDP NTTHVAAGLA
AMECVVVQDL FLNETANYAH VFLPGSTFLE KDGTFTNAER RIQLVRKVMA PLNGHADWEI
VQLVARAMGL DWTYDHPSEI MDEIARLTPS FAGVSFDLIA KYGSIQWPAN EKAPLGTPTM
HIGGFARGKG KFVVTDYVAT DEKTGPRYPL LLTTGRILSH YNVGAQTRRT ANVAWHPEDL
LEIHPLDAEN RGIKDRDWVY LRSRAGETTL RASVTERVAP GVVYTTFHHP VTQANVITTD
YSDWATNCPE YKVTAVQVGL SNGPSEWQED YSEQARQSRR ILVEAAE
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