| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1468 |
|---|
| Symbol | |
|---|
| ID | 5197023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 1617547 |
|---|
| End bp | 1619250 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640581016 |
|---|
| Product | potassium-transporting ATPase, A subunit |
|---|
| Protein accession | YP_001261970 |
|---|
| Protein GI | 148554388 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2060] K+-transporting ATPase, A chain |
|---|
| TIGRFAM ID | [TIGR00680] K+-transporting ATPase, KdpA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.084132 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTTG CCGGCTGGGC GCTGATCCTC GTCTTCATCG CCATCCTCCT CTTGCTGGCC
AAGCCGATGG GCGCGTGGAT GTTCGCGCTC TACGAAGGCC GGCGCACGCC ACTCCACCGG
CTCCTCGGGC CGGTGGAGAC CGGCTTCTAC CGCCTGTCGG GCATCGACCC GGCCGCCGAG
CAGGGCTGGC GCCGCTATGC GGTCCACATG ATCCTGTTCA ACCTGGGCCT GCTGCTGCTG
ACCTACGTCA TCCTGCGCAC CCAGGCCTGG TTGCCGTTCA ATCCGCGCGG CCTTCCCAAT
GTCGCGCCCG ACCTGGCGTT CAACACGGCG GTCAGCTTCA CCACCAACAC CAACTGGCAG
AGCTATGCCG GCGAGGCGAC GATGAGCCAG CTCAGCCAGA TGGTCGCGCT CACCGTCCAT
AATTTCACCA GCGCCGCCAC CGGCATCGCG CTCGCCTTCG CGCTGTTCCG CGGCTTCGCG
CGGCGCGAGG CGGGGACGAT CGGCAATTTC TGGGCCGATG TCACCCGCAT CACCCTCTAT
CTGCTGCTGC CGCTCTCGAT CCTGTTCGCG GTCTTCCTGA TCGCCAACGG GGTGCCGCAG
ACGCTCGCCG GATCGGTCGA CGCCACCACG GTCGAGGGCG CGCGCCAGTC GATCGCGCTG
GGGCCGGTCG CCAGCCAGGA GGCGATCAAG CTGCTCGGCA CCAACGGCGG CGGCTTCTTC
AACGCCAACT CGGCGCACCC CTTCGAGAAT CCGAACGCAC TGACCAACCT GTTCCAGATG
CTGTCGATCT TTCTGATCGC GGTCGGGCTG ACCTGGACCT TCGGCAAGGC GGTCGGCAAT
CCGCGCCAGG GCTGGGCGAT CCTCGCCGCG ATGCTGGTCC TGTTCCTGAT CGGCGCGAGC
GTCGTCTACT GGCAGGAGGC GGCCGGCAAC CCGGTGCTCC ACGGCCTCGG CGTCCCCGGC
GGCAACATGG AGGGCAAGGA GGTCCGCTTC GGCATCGCCG GCTCGGCGCT CTACGCCGCC
GTCACCACCG CCGCCTCGTG CGGCGCGGTC AACGCGATGC ACGACAGCTT CACGGCGCTG
GGCGGGATGA TCCCGCTGAT CAACATGCAG CTCGGCGAGG TCGTCGTCGG CGGCGTCGGC
GCGGGGGTCT ACGGCTTCCT GCTGTTCGCG ATCCTGGCGG TGTTCGTCGC CGGGCTGATG
GTCGGCCGCA GCCCCGAATA TGTCGGCAAG AAGATCGAGG CGCGCGAGGT GAAGCTCGCG
GTGCTGGCGA TCGCGGTGCT GCCGCTCGTC ATCCTCGGCT TCACCGCCCT GAGCGCGGTG
ACGCCCGCCG GCCTCGCCGG GCCGCTCGCC AAGGGGCCGC ACGGCTTCTC GGAGATCCTC
TACGCCTTCA CCAGCGGCGT CGCGAACAAC GGATCGGCCT TTGCCGGCCT GACCGCCGCC
ACCCCCTGGT ATGACGGGCT GCTCGGCGTC GCGATGTGGA TCGGCCGCTT CTTCGTGATC
ATCCCGATGC TCGCGATCGC CGGGTCGCTC GCCGCGAAGA AATATGTCCC GGCCGGCGCC
GGTTCCTTCC CCACCACGGG GCCGCTCTGG ATCGGCCTGC TCGTCGGCAT CGTCCTGATC
GTCGGCGGCC TGACCTTCCT GCCCAGCCTC GCGCTCGGCC CGATCGCCGA TCATCTCGCG
ATGATCCGCG GCCAGCTCTT CTGA
|
|---|
| Protein sequence | MSLAGWALIL VFIAILLLLA KPMGAWMFAL YEGRRTPLHR LLGPVETGFY RLSGIDPAAE
QGWRRYAVHM ILFNLGLLLL TYVILRTQAW LPFNPRGLPN VAPDLAFNTA VSFTTNTNWQ
SYAGEATMSQ LSQMVALTVH NFTSAATGIA LAFALFRGFA RREAGTIGNF WADVTRITLY
LLLPLSILFA VFLIANGVPQ TLAGSVDATT VEGARQSIAL GPVASQEAIK LLGTNGGGFF
NANSAHPFEN PNALTNLFQM LSIFLIAVGL TWTFGKAVGN PRQGWAILAA MLVLFLIGAS
VVYWQEAAGN PVLHGLGVPG GNMEGKEVRF GIAGSALYAA VTTAASCGAV NAMHDSFTAL
GGMIPLINMQ LGEVVVGGVG AGVYGFLLFA ILAVFVAGLM VGRSPEYVGK KIEAREVKLA
VLAIAVLPLV ILGFTALSAV TPAGLAGPLA KGPHGFSEIL YAFTSGVANN GSAFAGLTAA
TPWYDGLLGV AMWIGRFFVI IPMLAIAGSL AAKKYVPAGA GSFPTTGPLW IGLLVGIVLI
VGGLTFLPSL ALGPIADHLA MIRGQLF
|
|---|
| |