Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1459 |
Symbol | |
ID | 5199700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 1607698 |
End bp | 1608021 |
Gene Length | 324 bp |
Protein Length | 107 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640581007 |
Product | flagellar motor switch protein FliN |
Protein accession | YP_001261961 |
Protein GI | 148554379 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.717183 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACA TGTCCGACGT TCCCGCGGTT CCCGGCGCCG CCGAGCTGGC GGGGCGCGAC AATCTGCGGC TGCTGGCGGA CATCCCGCTG CGCCTGTCGG TCGAGGTCGG CAGCACCTCG CTCCGCCTCG CCGAGCTGAT GGACCTCAAC GCGGGCAGCG TGGTCGAGCT CGACCGCCAG GCCAATGAAT TGCTCGACAT CATGGTCAAC GGCACCCTCG TCGCGAAAGG CGAGGTAGTG ACAGTGAACG GAAAGTTCGG AATAAGGGTG GTCGACATCG TCGCCGCCGA CGCGCGGCTA CCGGGAATCG AACGCCGCCA ATGA
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Protein sequence | MTDMSDVPAV PGAAELAGRD NLRLLADIPL RLSVEVGSTS LRLAELMDLN AGSVVELDRQ ANELLDIMVN GTLVAKGEVV TVNGKFGIRV VDIVAADARL PGIERRQ
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