Gene Swit_1459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1459 
Symbol 
ID5199700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1607698 
End bp1608021 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content66% 
IMG OID640581007 
Productflagellar motor switch protein FliN 
Protein accessionYP_001261961 
Protein GI148554379 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1886] Flagellar motor switch/type III secretory pathway protein 
TIGRFAM ID[TIGR02480] flagellar motor switch protein FliN 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.717183 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA TGTCCGACGT TCCCGCGGTT CCCGGCGCCG CCGAGCTGGC GGGGCGCGAC 
AATCTGCGGC TGCTGGCGGA CATCCCGCTG CGCCTGTCGG TCGAGGTCGG CAGCACCTCG
CTCCGCCTCG CCGAGCTGAT GGACCTCAAC GCGGGCAGCG TGGTCGAGCT CGACCGCCAG
GCCAATGAAT TGCTCGACAT CATGGTCAAC GGCACCCTCG TCGCGAAAGG CGAGGTAGTG
ACAGTGAACG GAAAGTTCGG AATAAGGGTG GTCGACATCG TCGCCGCCGA CGCGCGGCTA
CCGGGAATCG AACGCCGCCA ATGA
 
Protein sequence
MTDMSDVPAV PGAAELAGRD NLRLLADIPL RLSVEVGSTS LRLAELMDLN AGSVVELDRQ 
ANELLDIMVN GTLVAKGEVV TVNGKFGIRV VDIVAADARL PGIERRQ