Gene Swit_1452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1452 
Symbol 
ID5200066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1600998 
End bp1601336 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content64% 
IMG OID640581000 
Productprotein translocase subunit yajC 
Protein accessionYP_001261954 
Protein GI148554372 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGCTT CTCCCGCATA CGCACAGGCC GCAGGCGCCG CCGGGTCCTC CTCCGGCAGC 
ACGATCTTCA TGCTCGGCCA GTTCGTCCTG ATCGGCGTCA TCTTCTATTT CCTGCTGATC
CGTCCGCAGC AGAAGCGGGC GAAGGAGCAT CGCGCGACGA TCGACGCGGT CAAGAAGAAC
GACGTGATCG TCACCGCCGG CGGCATCGTC GCCAAGGTGG TGAAGGTCGA CGAGACCGAG
GTCGAGGTCG AGATCGCCCC GAACGTCAAG ATCAAGATCG TCAAGGCCAC GATCGCCGAT
GTCCGCACCG CGGGCGCCGG CAAGCCCGCG AACGACTGA
 
Protein sequence
MFASPAYAQA AGAAGSSSGS TIFMLGQFVL IGVIFYFLLI RPQQKRAKEH RATIDAVKKN 
DVIVTAGGIV AKVVKVDETE VEVEIAPNVK IKIVKATIAD VRTAGAGKPA ND