| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1448 |
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| Symbol | |
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| ID | 5200242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1596088 |
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| End bp | 1597878 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640580995 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001261950 |
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| Protein GI | 148554368 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAGC CGAGCCATGT GCATGGCGCG GCCGAGCCGG CGCTATGGGA GATGACGATC
GGCGAAGCGC TGGACGCCGC CGCCCGGCGC TGGCCCGAGC GCGAGGCGCT GGTCGATTGC
GGGCAGGCGG TGCGGCTGAG CTGGCGCGAT CTCGCGCGCC GCGCCGGGGA TTTCGCCGCG
GGCCTGCTCG CGCTCGGCCT CGCGCCGGGC GACCGGATCG GCATCTGGTC GCTCAACCGG
GTCGAATGGG CGATCACCCA GTTCGCCGCC GCCAAGGCCG GGCTGGTGCT GGTGACGATC
AACCCCAACT ACCGGCTGTC GGAGCTCGAA TATGCGCTCC GCTCGGTCGG CTGCGCGGCG
GTGGTGACGG CGTCCGTCTT CAAGTCGAGC GACTATGTCG GCATGCTGCG GACGCTGATG
CCGGAAATGG CGGCGGGCCC CGGCTTCGTC GCGGAACGGC TGCCCGCGCT GCGCCACGTC
ATCCAGATGG ACCCCGAGCC GGTCGCGGGG GCCGTGGCCT TCGCGACGGT TGAAGCGCTG
GGACGCGACG CCGGACCGGC GCGGCTCCGC GCGCTGGAGG GTGTCCTCGG GTCCCGCGAC
CCGGTCAACA TCCAGTTCAC CAGCGGCACC ACCGGCCTGC CCAAGGGCGT GACGCTCAGC
CATCGCAATA TCCTCAACAA CGGCTATTTC ACCGGCCTGA AGCTCAAGCT GACGGCTCAG
GACCGGATCT GCATCCCGGT GCCGCTCTAT CATTGCTTCG GCATGGTGAT GGGCAATCTC
GCGGCCGTCA CCCATGGCGC CGCGATGGTC TATCCCGGCG AGGGCTTCGA TCCGCTCGCC
ACCCTCGCCG CCCTGTCCGG CGAGCGCTGC ACCGCGCTCT ACGGCGTGCC GACCATGTTC
ATCGCCCAGC TCGAGCATCC CGCCTTCGCG GCGCACGACC TCTCCAGCCT GCGCACCGGC
ATCATGGCCG GATCGCCCTG CCCGATCGAG GTGATGCGCA AGGCGATCGA CCGGATGAAC
CTGCGCGAGA TCACGATCTG CTACGGCATG ACCGAGACCA GCCCGGTCAG CTTCCAGAGC
GAGACCGACG ACCCGGTCGA GCTGCGCGTC GGAACGGTCG GCCGGGTCCA CCCGCATCTC
GAGGTCAAGA TCGTCGATGA CGCGGGGGAG ACCGTGCCGC GCGGCGTGGC GGGCGAGTTG
TGCACCCGCG GCTATTCGGT GATGCTCGGC TATTGGAACG ACCCGGAGCA GACCGCCGCC
GCGATCGACG ATGCGGGCTG GATGCACAGC GGCGACCTCG CGACGATCGA CGAGGACGGC
TATTGCCGGA TCGTCGGCCG GATCAAGGAC ATGGTGATCC GGGGCGGCGA GAATCTCTAC
CCGCGCGAGA TCGAGGAGTT CCTCCACACC CATCCGGCGA TCCGCGACGT CGCGGTCTTC
GGCGTCCCCG ACCGGCATTA TGGCGAGGAG CTATGCGCCT GGATCATCCG CCACGACGGC
GCGCCGATCG ACGAGACCGA GGTCCGCGCC TTCTGCCGGG GCCACATCTC GCACCAGAAG
ATTCCCCGCC ATATCCGCTT CGTCGATGCC TTCCCCCTCA CCGTCACCGG CAAGGTCCAG
AAGTTCGTCA TGCGCGAACA AATGGTCCGA GATTGGGAGG ACGCCTCGAC GCCGGGCCGG
GAGCCCGATC ACATCACGCC GGCGCGCGAT CCCGCAGGTC GCGCACCCGC GCCGCCTTGC
CCGACGAACG CGGCAGGGCG CCCGATTCGA CGATCCGGGT CCGGGCGCTG A
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| Protein sequence | MAEPSHVHGA AEPALWEMTI GEALDAAARR WPEREALVDC GQAVRLSWRD LARRAGDFAA
GLLALGLAPG DRIGIWSLNR VEWAITQFAA AKAGLVLVTI NPNYRLSELE YALRSVGCAA
VVTASVFKSS DYVGMLRTLM PEMAAGPGFV AERLPALRHV IQMDPEPVAG AVAFATVEAL
GRDAGPARLR ALEGVLGSRD PVNIQFTSGT TGLPKGVTLS HRNILNNGYF TGLKLKLTAQ
DRICIPVPLY HCFGMVMGNL AAVTHGAAMV YPGEGFDPLA TLAALSGERC TALYGVPTMF
IAQLEHPAFA AHDLSSLRTG IMAGSPCPIE VMRKAIDRMN LREITICYGM TETSPVSFQS
ETDDPVELRV GTVGRVHPHL EVKIVDDAGE TVPRGVAGEL CTRGYSVMLG YWNDPEQTAA
AIDDAGWMHS GDLATIDEDG YCRIVGRIKD MVIRGGENLY PREIEEFLHT HPAIRDVAVF
GVPDRHYGEE LCAWIIRHDG APIDETEVRA FCRGHISHQK IPRHIRFVDA FPLTVTGKVQ
KFVMREQMVR DWEDASTPGR EPDHITPARD PAGRAPAPPC PTNAAGRPIR RSGSGR
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