| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1440 |
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| Symbol | |
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| ID | 5199648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1584226 |
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| End bp | 1585818 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640580987 |
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| Product | glucose sorbosone dehydrogenase |
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| Protein accession | YP_001261942 |
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| Protein GI | 148554360 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00453751 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCCGTC CTTCCTCCCG GCCCGCCCGT TCCTGGGGCC TCCTCGCGCT GCTGATCGGG
GCGGCGGCGG TTCCGGCGCT GCTGTCCGCG CAGGCGGTCG ACGAGCAGGC GGCGGTCTAC
GGCCTCGACG CGCGATCGCC GGTGCCGCTG ACCAGCCAGA TCTTCGAGAA GAGCTGCGCG
GGCTGCCACG GCGCCGACAT GACCGGCGGG ATCGGCCCCT CGCTGATCGA TGCGACATGG
ATCCACGGCG GGGACGATGC CGCGATCCTG AAGACGATCG CGGAGGGCGT GCCCGACAAG
GGGATGCCCG CTTTCGCCGC TTCGCTGGCC GAGAATGAGC GGCTCGGCCT GCTGGCGCTG
ATCCGCGAGA AGGGGACCGA CTATATCAAG GCGCGGACGG TCGAATCGCT GCCTTTCCCG
ACCGGTCCGC AGACGAGCGC GCACGCCGCC TTCCGCTTCG AGACGGTGGT CGGCGAAGGG
CGGCTCGACA CGCCCTGGTC GATCCTGTTC CTGTCGCCGG ACCGGATGCT CGTCAGCGAA
CGGCCGGGCC GGCTGCGCAT CGTCACCACT GGCGGCGAGG TCGGCCCGCC GATCGCCAAC
GTCCCCGCCA TCGTCCATGA CTTCGGGCAG GGCGGGATAT TGGGCCTGGC GCGGCATCCC
GACTATCGGC GCAACGGCTA TCTCTACCTC GCCTATACCG ACGAGATGCC CGACCGGTTC
GGCGAGGCGC GGAAATGCGC CGGGCGGATC TATTGCTTCT CCACCGCGTC GCAGCTCAAG
GTGATCCGCT TCCGCCTCGC CGGCAACGCG ATGGTGGACC GGACGACGAT CTGGCAGGCC
GCGCCCGAAA GCTATCGTCT CTCGCCGAGC TTCGGCGGCC GGCTCGCCTT CGGCAGCGAC
GGGATGCTCT ACATCACGGT CGGCGACCGG GCCTATTCGG CGATGGAGGC GCAGGACATC
GCCACCCCCA ACGGCAAGAT CCATCGCGTC GCCGACGACG GCCATGTTCC GCCGGACAAT
CCGTTCGTCG GCGTGCCGGG CGCCGATCCG ACGATCTGGA GCTTCGGCCA TCGCAATCCC
CAGGGCCTCG CCGTCGATCC GCGCAGCGGC CGGCTCTGGT CGTCCGAACA TGGCCCGCGC
GGCGGCGACG AGCTCAACCT GATCCGGCGC GGCGGCAATT ATGGCTGGCC GCTCGCGACC
TTCGGCATGG GCTATGACGG GCGTCCGTTC GACCCGGCCT ATCCGCTCGG CCATTCGCAA
GCGGCGATCG AACTGACCGC GCCGTCGCGC CCGATCGACC GTGCCGGCTT CATCGCCCCG
GTCGTTCACT GGACGCCGTC GATCGCGGTA TCGTCGATCC TCTTCTATTC CGGCACGGCA
TTCCCCGCCT GGCGCGACAG CCTGCTCGTC ACCTCGCTTC GCCAGCAGAA GCTGCTGCGC
CTGACGATCG AGCATGATGC GGTGACCGAA CAGGAACTGC TCTTCGAACG GCACGGCAAC
GTCCGCGACG TTGCCGAGGC GCCGGACGGA AGCCTCTATG TCGCGATGAA CCTCCCGTCA
CAGATCATCC GCATGGTCCC CGCGATGAAG TGA
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| Protein sequence | MTRPSSRPAR SWGLLALLIG AAAVPALLSA QAVDEQAAVY GLDARSPVPL TSQIFEKSCA
GCHGADMTGG IGPSLIDATW IHGGDDAAIL KTIAEGVPDK GMPAFAASLA ENERLGLLAL
IREKGTDYIK ARTVESLPFP TGPQTSAHAA FRFETVVGEG RLDTPWSILF LSPDRMLVSE
RPGRLRIVTT GGEVGPPIAN VPAIVHDFGQ GGILGLARHP DYRRNGYLYL AYTDEMPDRF
GEARKCAGRI YCFSTASQLK VIRFRLAGNA MVDRTTIWQA APESYRLSPS FGGRLAFGSD
GMLYITVGDR AYSAMEAQDI ATPNGKIHRV ADDGHVPPDN PFVGVPGADP TIWSFGHRNP
QGLAVDPRSG RLWSSEHGPR GGDELNLIRR GGNYGWPLAT FGMGYDGRPF DPAYPLGHSQ
AAIELTAPSR PIDRAGFIAP VVHWTPSIAV SSILFYSGTA FPAWRDSLLV TSLRQQKLLR
LTIEHDAVTE QELLFERHGN VRDVAEAPDG SLYVAMNLPS QIIRMVPAMK
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