Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1440 |
Symbol | |
ID | 5199648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1584226 |
End bp | 1585818 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640580987 |
Product | glucose sorbosone dehydrogenase |
Protein accession | YP_001261942 |
Protein GI | 148554360 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00453751 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCCGTC CTTCCTCCCG GCCCGCCCGT TCCTGGGGCC TCCTCGCGCT GCTGATCGGG GCGGCGGCGG TTCCGGCGCT GCTGTCCGCG CAGGCGGTCG ACGAGCAGGC GGCGGTCTAC GGCCTCGACG CGCGATCGCC GGTGCCGCTG ACCAGCCAGA TCTTCGAGAA GAGCTGCGCG GGCTGCCACG GCGCCGACAT GACCGGCGGG ATCGGCCCCT CGCTGATCGA TGCGACATGG ATCCACGGCG GGGACGATGC CGCGATCCTG AAGACGATCG CGGAGGGCGT GCCCGACAAG GGGATGCCCG CTTTCGCCGC TTCGCTGGCC GAGAATGAGC GGCTCGGCCT GCTGGCGCTG ATCCGCGAGA AGGGGACCGA CTATATCAAG GCGCGGACGG TCGAATCGCT GCCTTTCCCG ACCGGTCCGC AGACGAGCGC GCACGCCGCC TTCCGCTTCG AGACGGTGGT CGGCGAAGGG CGGCTCGACA CGCCCTGGTC GATCCTGTTC CTGTCGCCGG ACCGGATGCT CGTCAGCGAA CGGCCGGGCC GGCTGCGCAT CGTCACCACT GGCGGCGAGG TCGGCCCGCC GATCGCCAAC GTCCCCGCCA TCGTCCATGA CTTCGGGCAG GGCGGGATAT TGGGCCTGGC GCGGCATCCC GACTATCGGC GCAACGGCTA TCTCTACCTC GCCTATACCG ACGAGATGCC CGACCGGTTC GGCGAGGCGC GGAAATGCGC CGGGCGGATC TATTGCTTCT CCACCGCGTC GCAGCTCAAG GTGATCCGCT TCCGCCTCGC CGGCAACGCG ATGGTGGACC GGACGACGAT CTGGCAGGCC GCGCCCGAAA GCTATCGTCT CTCGCCGAGC TTCGGCGGCC GGCTCGCCTT CGGCAGCGAC GGGATGCTCT ACATCACGGT CGGCGACCGG GCCTATTCGG CGATGGAGGC GCAGGACATC GCCACCCCCA ACGGCAAGAT CCATCGCGTC GCCGACGACG GCCATGTTCC GCCGGACAAT CCGTTCGTCG GCGTGCCGGG CGCCGATCCG ACGATCTGGA GCTTCGGCCA TCGCAATCCC CAGGGCCTCG CCGTCGATCC GCGCAGCGGC CGGCTCTGGT CGTCCGAACA TGGCCCGCGC GGCGGCGACG AGCTCAACCT GATCCGGCGC GGCGGCAATT ATGGCTGGCC GCTCGCGACC TTCGGCATGG GCTATGACGG GCGTCCGTTC GACCCGGCCT ATCCGCTCGG CCATTCGCAA GCGGCGATCG AACTGACCGC GCCGTCGCGC CCGATCGACC GTGCCGGCTT CATCGCCCCG GTCGTTCACT GGACGCCGTC GATCGCGGTA TCGTCGATCC TCTTCTATTC CGGCACGGCA TTCCCCGCCT GGCGCGACAG CCTGCTCGTC ACCTCGCTTC GCCAGCAGAA GCTGCTGCGC CTGACGATCG AGCATGATGC GGTGACCGAA CAGGAACTGC TCTTCGAACG GCACGGCAAC GTCCGCGACG TTGCCGAGGC GCCGGACGGA AGCCTCTATG TCGCGATGAA CCTCCCGTCA CAGATCATCC GCATGGTCCC CGCGATGAAG TGA
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Protein sequence | MTRPSSRPAR SWGLLALLIG AAAVPALLSA QAVDEQAAVY GLDARSPVPL TSQIFEKSCA GCHGADMTGG IGPSLIDATW IHGGDDAAIL KTIAEGVPDK GMPAFAASLA ENERLGLLAL IREKGTDYIK ARTVESLPFP TGPQTSAHAA FRFETVVGEG RLDTPWSILF LSPDRMLVSE RPGRLRIVTT GGEVGPPIAN VPAIVHDFGQ GGILGLARHP DYRRNGYLYL AYTDEMPDRF GEARKCAGRI YCFSTASQLK VIRFRLAGNA MVDRTTIWQA APESYRLSPS FGGRLAFGSD GMLYITVGDR AYSAMEAQDI ATPNGKIHRV ADDGHVPPDN PFVGVPGADP TIWSFGHRNP QGLAVDPRSG RLWSSEHGPR GGDELNLIRR GGNYGWPLAT FGMGYDGRPF DPAYPLGHSQ AAIELTAPSR PIDRAGFIAP VVHWTPSIAV SSILFYSGTA FPAWRDSLLV TSLRQQKLLR LTIEHDAVTE QELLFERHGN VRDVAEAPDG SLYVAMNLPS QIIRMVPAMK
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