| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1436 |
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| Symbol | |
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| ID | 5197408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1579132 |
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| End bp | 1581381 |
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| Gene Length | 2250 bp |
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| Protein Length | 749 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640580983 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001261938 |
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| Protein GI | 148554356 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000358025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000102915 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAACAAAT CCAGATTTTT CAGCCTGATC GCGACGTCGT CGTTGATCTG CCTGCTGCCG
GGCGGCGCCC TGGCACAGTC CGACTCACCG GCGGCCGAAG GCGGGCTTGC CGACATCGTC
GTCACGGCGA CGAAATCGGG ACAGACGGCG CTTCAGTCGA CGCCTCTCGC CGTTTCCGCC
TTCTCCGGGC AGGAATTGAG CCGCACGAGC ACGACCGGGG TCGCCGACCT GGCACGCTAT
ACGCCCAGCC TGAAGGTCGG CGAGGTCACC GCGAGCCCGT CGATCTACAT CCGTGGCATC
GGCACCAACA ATGTCTTCAA CGGCTCGGAC CCGAATGTCG CGATGCTGCT CGACGGCGTG
TATCTCGCGC GCGCCTTCCA GCAATATTCG GACTTTTTCG ACGTCGACCG GGTCGAGGTG
CTGCGGGGCC CGCAGGGCAC GACCTTCGGA CGCAACGCCG TGGGCGGCGT CATCAACATC
GTATCGCGCC GGCCTTCGGA CGAGTTCGAG GGCAAGGCCA AGCTCACCGT GGGCAATTAC
GACCTGATCC GTGGCGAAGC CTTCGCGTCG GGGCCGCTGA TCCCCGATGT CCTGGCGGCC
AGCGTCGCGG GCAATTACGA ATATCACAAG CCCTACAACC GCAACATCGT GCCCGGAAAG
AAAGGCGTGG CGAGCGCCGA CCGCGGCGGC ATGCGGATGC AGGTCCGGTG GACGCCCAAC
GACATGATCG ATGCCACCAC CCGCATCGAC TATAACCGGC TGTCCCAGGC AATGCAGAGC
TACGACCATC TGCTGGTCCC CTACCCCGCC TTCCTCGCCC CCTTCTTCAG CCTCGCGAAC
TCGACGGTCG GCAAATATCA CACCGTCGCG CTGGATAGCC CCGGCCATAT CCTCAACAAG
GCCTGGGGCA TCGCGGAGGA CGTGACCTTC ACCTTCAGCG AGCAGGTGTC GCTCCGCTCG
ATCACCGCTT ACCGCGACAG CCGCTACAGC CTGTCGCTGG ACGCGGACGC CAGCGAAGTC
GCCGCCGCCG AGATATTCCA GGGCGAACGC GCCAAGCAGT TCAGCCAGGA GTTCAACCTC
GTCGGCAATT TCGACGATTT CGACGGCGTC CTCGGCCTCT ACTACATCAA GGAACACAAC
CGGTCGGACA ACAGGGCGAT CATCTACCCG CCCTTCGGCG GCGAGCTGAA CGTCATCGCG
CCCGATCTGC GCGCCAATTC CAAGGCCGTC TTCGCTCAGG GTTCCTACCA TCTTCCGGCC
GGCTTCAGCG TGACGGCCGG CGGGCGCTAC ACGAAGGACA CCAAGAAGTT CGACCAGATC
TATTCGAGCT TCGATTTCAG CAATCCCCCC GCCGTCGGCG GCCAGCTCCC CGGCTTCCCC
TTCGATCCGC CACGGCTGCG GCGAAGCTGG GACGATTTCT CGATGAAGCT GGGTGTGGAC
TGGCAGGCGA ACCGCGACAT CCTGGCCTAT GCGACCTATT CGGAAGGCTT CAAGAGCGGC
GGGTTCAACT ATGCCGCGAT CAACACCGCC GGCATCAGCT TCGAGCCCGA GCATCTCAAG
AGCTACGAGC TGGGCCTGAA GACCCAATGG CTCGACCGGC GCGTGCGGCT GAACCTGACC
GGTTTCCGTT ATGACTATTC CGGCCTGCAG GTGCAGCAGT CGCTTTCGCC CGGCAACGTC
CAGATCACCA ACGCCGCGAC CGCAAGGGTC AAGGGCATCG AAGCGGAGCT CGTGGCCCAG
GCCACGCCGC GCCTCACCCT GTCCGCCAAT CTCAGCTATC TGGACGCGAA ATATCGTCGC
TTCCCCACGG CGTCGGTCCC GGACGCGCTC GTGCCCTTCG TGGAGGACGA TCCGCGCTTC
ACGCCCGGCG ACGACGATGC CGAGGATTCG GGCCTGTTCA ACGCTTCGGG CAATCGCCTG
AACAACGCGC CCCGGCTGTC CTACACCCTC TCGGCCAAAT ACACCCAGCC GATCGGTCGG
GGCGAAGCCT ATCTGGCGGC CGATTATTAT CACCAGAGCA GCACCCATTT CGATGCGTCC
AACGCCGCGA TCCTGCGCGA GCCCGGCTAT GGCCTCGTCA ATCTCGCGAT CGGCTACAAT
TCGCCGGACC GGCTGTGGAA CATCCAGTTG CTCGCCAAGA ATCTGCTCGA CGAGGACTAT
TTCGTGGTGC GGGCCGCGAA TGGCCTGGTG CCTTCCGCGC CCAGCGGGCC GCCGCGGACG
GTGATGTTCA GCGTGATGCG TTCCTTCTGA
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| Protein sequence | MNKSRFFSLI ATSSLICLLP GGALAQSDSP AAEGGLADIV VTATKSGQTA LQSTPLAVSA
FSGQELSRTS TTGVADLARY TPSLKVGEVT ASPSIYIRGI GTNNVFNGSD PNVAMLLDGV
YLARAFQQYS DFFDVDRVEV LRGPQGTTFG RNAVGGVINI VSRRPSDEFE GKAKLTVGNY
DLIRGEAFAS GPLIPDVLAA SVAGNYEYHK PYNRNIVPGK KGVASADRGG MRMQVRWTPN
DMIDATTRID YNRLSQAMQS YDHLLVPYPA FLAPFFSLAN STVGKYHTVA LDSPGHILNK
AWGIAEDVTF TFSEQVSLRS ITAYRDSRYS LSLDADASEV AAAEIFQGER AKQFSQEFNL
VGNFDDFDGV LGLYYIKEHN RSDNRAIIYP PFGGELNVIA PDLRANSKAV FAQGSYHLPA
GFSVTAGGRY TKDTKKFDQI YSSFDFSNPP AVGGQLPGFP FDPPRLRRSW DDFSMKLGVD
WQANRDILAY ATYSEGFKSG GFNYAAINTA GISFEPEHLK SYELGLKTQW LDRRVRLNLT
GFRYDYSGLQ VQQSLSPGNV QITNAATARV KGIEAELVAQ ATPRLTLSAN LSYLDAKYRR
FPTASVPDAL VPFVEDDPRF TPGDDDAEDS GLFNASGNRL NNAPRLSYTL SAKYTQPIGR
GEAYLAADYY HQSSTHFDAS NAAILREPGY GLVNLAIGYN SPDRLWNIQL LAKNLLDEDY
FVVRAANGLV PSAPSGPPRT VMFSVMRSF
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