Gene Swit_1431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1431 
Symbol 
ID5198227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1571470 
End bp1571970 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content59% 
IMG OID640580978 
Producthypothetical protein 
Protein accessionYP_001261933 
Protein GI148554351 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00752075 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCGACA GCCTTCAGAC TTTATTGGAC AAGCGCGCGC TCGACGAGAT GGTGTACAAG 
TGCATGCACG CCATGGATAC TCACCAATGG GCGCTCTACC GGGCCAATAT CGTCGAGGAT
GCGACCTTCG ACTTCACCGA TCATGGCGTT GCGACCGACG ATGCCGCGGA GCCGATGCGC
GGTGCCGACA ATTATCTCGA AATCCTGGCC TCGGTCATCA CCGGTTTCGA TTCCACCCAG
CATGTCGTGA GCAACATGTA TCACGAGGTC GAAGGGGATA GGGCCCGGAC CAGATGCTAT
ATCCAAGCCG AGCACTTCCT CAATAACGAC CGGGGCGATC GCCGGGTGGC CTGCGGTGGC
CGCTATCTGA TCGACGCCAT CCGCACGCCC GACGGATGGA AGATCAAGCA CCTGAAATTC
CAGACCTTCT GGTTTACCGG AAACACGACG CTCTACGAAC TCGCAGGTCG TGCGAGCGCG
GCGAAGCGCG TGGCCGCATG A
 
Protein sequence
MADSLQTLLD KRALDEMVYK CMHAMDTHQW ALYRANIVED ATFDFTDHGV ATDDAAEPMR 
GADNYLEILA SVITGFDSTQ HVVSNMYHEV EGDRARTRCY IQAEHFLNND RGDRRVACGG
RYLIDAIRTP DGWKIKHLKF QTFWFTGNTT LYELAGRASA AKRVAA