Gene Swit_1429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1429 
Symbol 
ID5198225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1569239 
End bp1570390 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content68% 
IMG OID640580976 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001261931 
Protein GI148554349 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00860523 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTGCAC CTCATTTCCA TATCGCCATC GTCGGCGCCG GTATCGCCGG GGCGTCGCTC 
GCGGCGAATC TGCCGACCGG CCAGCGCGTG TTGCTGGTGG AGGGTGAGGA TGTGCCCGGC
TTCCATTCCA CGGGGCGGTC GGCGGCGATC TTCTCGGGAA TTTACGGAAA TGCGCCGGTG
CGGGCATTGT CGCGCGCGAG TTTCGACTTC TTCTCCTCCC CGCCGGACGG TTTCTGCGAC
GCGCCGCTGA TATCGGATCG GGGTGTTCTC TTTCTCGTCG GCGGGGACCA GTCGGCATCG
CTGGAAAAAA TGCTGGAGGA GCCGGACGTG CGGGGGGCGA CGCGATTGGT CGATGTGGCC
GAGGCCGTTG CGATGGTGCC CTATCTCAAG CCCGATTCCA TCGCCTGCGG CCTGTACGAA
CCCGATGCCA TGGACCTGGA CGTCAGCCTG CTGCACTCGG CTTTCCTCCG GCAGGCCAGG
GCGCGCGGCG TGGAATATGC AGGGTCCGCG TCCGTTTCGG CGATAGCGCG GCTTGATGGC
GCCTGGACGC TTCATACGCC CAAGGGGGAT TTCACCGCCG ATGTCCTGGT CAATGCCGCG
GGCGCCTGGG CGGATCGGCT GGCGGGCATG GCAGGCGCGG CGCCTCGCGG CATCCGGCCG
ATGCGGCGGA CGATGGTGCT GGCCGATATC GCGGGCGATG CCGTCGACCA TGGCTGCCCC
ATGGTGGTCG ACATCGACGA GCAATTCTAT TTCCGGCCGG AATCGGGTGG TCTCCTGCTT
TCTCCGGCCG ACGAGACGCC GGTCGAACCC GGTGACGTCC ACCCCGAAGA ACTGGACATC
GCGATCGCGA TCGACCGGGT GGAGGCGGTT GCCGCGTTGA CCTTCCGACG GGTCCGCAGC
AGCTGGGCCG GGTTGCGGAG TTTCGCGCCG GACAAGACCC CCGTGGTCGG GTTCGACGGG
GCGGTTCCGA ACTTCTTCTG GCTGGCCGGG CAAGGCGGTT ATGGCATTCA GACGGCTCCG
GCGCTGGGGC GGCTGGCAGC GGCGCTCCTG ATGGGCGAGG CGCTGCCGCA GCGGCTTGCC
GACCACGGCG TCGACGCACG GGCGCTCGAT CCCAATCGGC CGTCGCTGGC TGTCGAGGGA
ACGGCGGCGT GA
 
Protein sequence
MTAPHFHIAI VGAGIAGASL AANLPTGQRV LLVEGEDVPG FHSTGRSAAI FSGIYGNAPV 
RALSRASFDF FSSPPDGFCD APLISDRGVL FLVGGDQSAS LEKMLEEPDV RGATRLVDVA
EAVAMVPYLK PDSIACGLYE PDAMDLDVSL LHSAFLRQAR ARGVEYAGSA SVSAIARLDG
AWTLHTPKGD FTADVLVNAA GAWADRLAGM AGAAPRGIRP MRRTMVLADI AGDAVDHGCP
MVVDIDEQFY FRPESGGLLL SPADETPVEP GDVHPEELDI AIAIDRVEAV AALTFRRVRS
SWAGLRSFAP DKTPVVGFDG AVPNFFWLAG QGGYGIQTAP ALGRLAAALL MGEALPQRLA
DHGVDARALD PNRPSLAVEG TAA