Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1429 |
Symbol | |
ID | 5198225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1569239 |
End bp | 1570390 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640580976 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001261931 |
Protein GI | 148554349 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00860523 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTGCAC CTCATTTCCA TATCGCCATC GTCGGCGCCG GTATCGCCGG GGCGTCGCTC GCGGCGAATC TGCCGACCGG CCAGCGCGTG TTGCTGGTGG AGGGTGAGGA TGTGCCCGGC TTCCATTCCA CGGGGCGGTC GGCGGCGATC TTCTCGGGAA TTTACGGAAA TGCGCCGGTG CGGGCATTGT CGCGCGCGAG TTTCGACTTC TTCTCCTCCC CGCCGGACGG TTTCTGCGAC GCGCCGCTGA TATCGGATCG GGGTGTTCTC TTTCTCGTCG GCGGGGACCA GTCGGCATCG CTGGAAAAAA TGCTGGAGGA GCCGGACGTG CGGGGGGCGA CGCGATTGGT CGATGTGGCC GAGGCCGTTG CGATGGTGCC CTATCTCAAG CCCGATTCCA TCGCCTGCGG CCTGTACGAA CCCGATGCCA TGGACCTGGA CGTCAGCCTG CTGCACTCGG CTTTCCTCCG GCAGGCCAGG GCGCGCGGCG TGGAATATGC AGGGTCCGCG TCCGTTTCGG CGATAGCGCG GCTTGATGGC GCCTGGACGC TTCATACGCC CAAGGGGGAT TTCACCGCCG ATGTCCTGGT CAATGCCGCG GGCGCCTGGG CGGATCGGCT GGCGGGCATG GCAGGCGCGG CGCCTCGCGG CATCCGGCCG ATGCGGCGGA CGATGGTGCT GGCCGATATC GCGGGCGATG CCGTCGACCA TGGCTGCCCC ATGGTGGTCG ACATCGACGA GCAATTCTAT TTCCGGCCGG AATCGGGTGG TCTCCTGCTT TCTCCGGCCG ACGAGACGCC GGTCGAACCC GGTGACGTCC ACCCCGAAGA ACTGGACATC GCGATCGCGA TCGACCGGGT GGAGGCGGTT GCCGCGTTGA CCTTCCGACG GGTCCGCAGC AGCTGGGCCG GGTTGCGGAG TTTCGCGCCG GACAAGACCC CCGTGGTCGG GTTCGACGGG GCGGTTCCGA ACTTCTTCTG GCTGGCCGGG CAAGGCGGTT ATGGCATTCA GACGGCTCCG GCGCTGGGGC GGCTGGCAGC GGCGCTCCTG ATGGGCGAGG CGCTGCCGCA GCGGCTTGCC GACCACGGCG TCGACGCACG GGCGCTCGAT CCCAATCGGC CGTCGCTGGC TGTCGAGGGA ACGGCGGCGT GA
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Protein sequence | MTAPHFHIAI VGAGIAGASL AANLPTGQRV LLVEGEDVPG FHSTGRSAAI FSGIYGNAPV RALSRASFDF FSSPPDGFCD APLISDRGVL FLVGGDQSAS LEKMLEEPDV RGATRLVDVA EAVAMVPYLK PDSIACGLYE PDAMDLDVSL LHSAFLRQAR ARGVEYAGSA SVSAIARLDG AWTLHTPKGD FTADVLVNAA GAWADRLAGM AGAAPRGIRP MRRTMVLADI AGDAVDHGCP MVVDIDEQFY FRPESGGLLL SPADETPVEP GDVHPEELDI AIAIDRVEAV AALTFRRVRS SWAGLRSFAP DKTPVVGFDG AVPNFFWLAG QGGYGIQTAP ALGRLAAALL MGEALPQRLA DHGVDARALD PNRPSLAVEG TAA
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