| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1427 |
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| Symbol | |
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| ID | 5198223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1566464 |
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| End bp | 1567717 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640580974 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001261929 |
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| Protein GI | 148554347 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0220727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAGG TGACGGCGCC GGCCTCCGAA CTTCGCCAGA ACTGGAAGCT GCTTGTCGCG
GCGACGCTGT GCGCCGCGAT GGGCATGCCG ACGCTGGCGT TGTTCAGCAT CGGCATCTTC
GCCCCCATCT TCGCCAAGGC GTTCGGCTGG TCTTTCGCGG CGATCATGGG CGGGCTGGCG
CTCAGCTCGG TCCTCATCCT GTTGGTGGGG CCGATCGTCG GCAGGCGCGT GGACCGATAT
GGATCGCGCG GGATCGGGGC GATCTCGCTC GCGGGGCTGG GGATCGGCTA TGCCAGCTTC
GCGCTCGCGA CCGGATCGAT CGTCCAATAT TATCTGAGCT GGTTCTGCTT CGCGCTGTTC
GGGATGGGCG CGACCGCGAT CACCTTCTCG CATGCGATCA GCCGGAATTT CTCGCGCCAG
CGTGGCATCG CGCTCGGCAT CACCCTGTCC GGTTCGGGCC TGTGCGCCAT CCTGGTGAAG
CTGTTCGCCA ACTGGGCGAT CGATCCGCTC GGATGGCGGA TGACGATGGT CGCGATCGGC
GCGGTCCCGA TAGTGGTGGG CATACCGCTG ATCCTCTGGG GCTTTCCCCG TCGCTCCGAA
GGGGCCGTGG CGAGCGTGCC TGAAAGCGCC GTCTCCGCAC CGGCGGCGCT GCCGGGGATG
ACGCGCGGCG AAGCTTTCCA GAGCCGGGCC TTCTGGCTCA TCGCGCTGGG TTTCACGCCG
ATCGCCTTCG CCAACGGCGC CCCGCTGCCC AATATGGAGA ACATCCTCCA GGCGGTCAGC
GTCGGGCCGG AGGACGTCGT CCGCATCACG TCGCTGATGG GCGGGTTCAT CCTGATCGGA
CGGATCGCCG GCGGATGGCT GATCGATCAT TTCTGGGCAC CCGCCGTCGC CGCCGTCCTG
CTGCTGCTCG CGTCCGCAGG CTGCATGCTG CTGGCCCAGG ATCAGATCAC CCATGTGCAG
GCGATGATCG CCGTCGCCGC GCTCAGTGCA GCGGCGGGGA TGGAATATGA TCTGCTCGCC
TTCCTGATCG CCCGCTATAT CGGCGTCCGC AGCTATGGTG CGGTCTATGG CATCCTGTTC
GGCCTGTTCG CGATCGGCGC GGGCGGCGGG CCCGCGCTTC TGGGGCGTGC CTTCGATCTG
GCCGGCAATT ACGCTATCGG CCTGATCTGC TGCGCGATCG CTCTGGCGGT GGCGATCGTG
CCCATCCTAT TGCTCGGCCG ATACCCCGTT TTCGAGACCG TCGCGCCGGA ATGA
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| Protein sequence | MNEVTAPASE LRQNWKLLVA ATLCAAMGMP TLALFSIGIF APIFAKAFGW SFAAIMGGLA
LSSVLILLVG PIVGRRVDRY GSRGIGAISL AGLGIGYASF ALATGSIVQY YLSWFCFALF
GMGATAITFS HAISRNFSRQ RGIALGITLS GSGLCAILVK LFANWAIDPL GWRMTMVAIG
AVPIVVGIPL ILWGFPRRSE GAVASVPESA VSAPAALPGM TRGEAFQSRA FWLIALGFTP
IAFANGAPLP NMENILQAVS VGPEDVVRIT SLMGGFILIG RIAGGWLIDH FWAPAVAAVL
LLLASAGCML LAQDQITHVQ AMIAVAALSA AAGMEYDLLA FLIARYIGVR SYGAVYGILF
GLFAIGAGGG PALLGRAFDL AGNYAIGLIC CAIALAVAIV PILLLGRYPV FETVAPE
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