| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1423 |
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| Symbol | |
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| ID | 5196753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1561226 |
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| End bp | 1563319 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640580969 |
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| Product | oligopeptidase B |
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| Protein accession | YP_001261925 |
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| Protein GI | 148554343 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1770] Protease II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0258557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCACG ACCTGCCTGC GCCGCCCGTC GCGGCCCGCC GTCCGCACAG CTATAGCCGC
CACGGCCGCA CGATCGACGA TCCCTGGGCC TGGCTCAAGG ACCCGAAATA TCCGACCGTC
GACGATCCCG ACGTCCTCGC CTATCTGCGC GAGGAGAACG CCTATTTCGA GGCGGCGATG
CAGCCGCACG CGGCGCTGGT CGAGACGCTG TTCGCCGAGA TGAAGGGCCG CCTCAAGGAG
GACGACGCCA GCGTCCCCCG GAAGGACGGC GACTGGCTCT ACTGGTGGGC CTACAAGCCG
GGCGGCCAAT ATCGCCTCTG GTATCGCAAG CCCGCCGACG GCGGCGCCGA TGCCGATGCC
GATGCCGATG CCACCGGGAC GGTGATCCTC GACGAGCCGG CCGAGGCCGC GACGGTCGAC
TATTTCCGCC TGCAGGTGCT GAGCGTCAGC CCCGACGGCC GGCTCGCCGC CTGGTCGGCC
GACCGCAGCG GCGCCGAGCG GTTCGAGCTG CGCATCCGCG ACCTCGCCAC CGGGCAGGAC
ATCGAGACGG TCACGACGGT CGCCAACGGC GCGGTCGCCT GGGGCAATGA CTCGCGCAGC
CTCGCCTACA CCGAGGTCAA CGACAATTGG CGCACCTATC GCGCGCGGCT CCACATCCTC
GGCACCGATC CGGCGACCGA CCGGACGCTG TACGAGGAGA CCGAGGAGCT CGGCTTCAAC
GTCGGCGTCG GCAAGACTCA GGACGAGCGC TGGATCGTCA TCGCCACCGG CGACAACCAG
ACGAGCGAGG TCCGCCTCGT CCCCGCTGAC GATCCGGGCG CCGCGCCGCT GCTGGTCAGC
GCGCGGCAGG TGAAGCGCGA ATATACGGTC GACAGCGCGC ATGGGTCGCT CTGGATCCTG
ACCAACGACG ACCATGTGAA CTTTCGCGTG GCGCGCGCCG ATCCGGCCGA TCCGGGCCGG
TGGGAGACGG TGATCGCCGG TTCGGACCGC GTCTACATTC GCGGGCTGAC CGCCTTCGCC
AGGCATCTGG TGCTGACCGA ACGGGTCGAC GGGCTCGATC AGGTCCGCCT GCGCGGCTAT
GACGGCGCCG AGCACCGCAT CGCCTTTCCG GAGGCGAGCT ACACTGCCGG CCTCGGCAGC
AACCCCGAAT ATGACCCGGC CGCCTATCGG CTGAGCTATG CGTCGATGGT CACGCCGCAG
ACGGTGTTCG ACTATGATCC CGCCGCACGG ACGCTGACGA CGCTCAAGGT GCAGGAGATC
CCGTCGGGCT ATGATCCGTC GCTCTACGCG ACCGAGCGGC TGATGGTCCC TGCGCGCGAC
GGCAAGGCGA TCCCGGTGTC GGTGGTCTAT CGCAAGGGCT TCCCGAAGGA CGGGTCGGGC
AAGTTGTTCC TCTATGCCTA TGGCGCCTAT GGCCATGCGA TCCCGCCGGG CTTCTCGACC
GTGCGGCTGT CGATGGTCGA TCGCGGCTGG GCCTATGCGA TCGCCCATAT CCGCGGCGGC
GACGACCTCG GCTATGACTG GTATCTGCAG GGCAAGGCCG AGCAGCGCTG GAACACCTTC
CACGATTTCT CCGACGCGGC GAAGGGGCTG ATCGCGGCGG GCTTCACCAG CGCCGGCAAG
ATCGCGATCA ACGGCGGCTC GGCGGGCGGC GAACTGATGG GCGTGGTCGC CAACACCGAT
CCCGAGCTAT GGGGCGCGGT GGTCGCCGAC GTGCCCTTCG TCGACGTGCT CAACACGATG
CAGGACGAAA GCCTGCCGCT GACGCCGGGC GAATGGCCCG AATGGGGCAA TCCGATCACC
GACCCGGCGG CGTTCGAGCT GATCCGCAGC TACAGCCCCT ATGACAATGT CGCGGCGAAA
GCCTATCCGC CGATGCTGAT CACCGGCGGC CTCAACGATC CGCGCGTCAC CTATTGGGAG
CCCGCCAAAT GGGCGGCCCG GCTGCGCGCG ACCAAGACCG ACGACCATCT GCTGCTGCTC
AAGATCAACA TGGGCGCGGG GCATGGCGGC AAGTCGGGCC GCTATGAATC GCTGCGCGAG
GATGCGGAGG CCTATGCGTT CGTGCTGACG CAGATGGGCG GCGCGGGGGC CTGA
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| Protein sequence | MTHDLPAPPV AARRPHSYSR HGRTIDDPWA WLKDPKYPTV DDPDVLAYLR EENAYFEAAM
QPHAALVETL FAEMKGRLKE DDASVPRKDG DWLYWWAYKP GGQYRLWYRK PADGGADADA
DADATGTVIL DEPAEAATVD YFRLQVLSVS PDGRLAAWSA DRSGAERFEL RIRDLATGQD
IETVTTVANG AVAWGNDSRS LAYTEVNDNW RTYRARLHIL GTDPATDRTL YEETEELGFN
VGVGKTQDER WIVIATGDNQ TSEVRLVPAD DPGAAPLLVS ARQVKREYTV DSAHGSLWIL
TNDDHVNFRV ARADPADPGR WETVIAGSDR VYIRGLTAFA RHLVLTERVD GLDQVRLRGY
DGAEHRIAFP EASYTAGLGS NPEYDPAAYR LSYASMVTPQ TVFDYDPAAR TLTTLKVQEI
PSGYDPSLYA TERLMVPARD GKAIPVSVVY RKGFPKDGSG KLFLYAYGAY GHAIPPGFST
VRLSMVDRGW AYAIAHIRGG DDLGYDWYLQ GKAEQRWNTF HDFSDAAKGL IAAGFTSAGK
IAINGGSAGG ELMGVVANTD PELWGAVVAD VPFVDVLNTM QDESLPLTPG EWPEWGNPIT
DPAAFELIRS YSPYDNVAAK AYPPMLITGG LNDPRVTYWE PAKWAARLRA TKTDDHLLLL
KINMGAGHGG KSGRYESLRE DAEAYAFVLT QMGGAGA
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