Gene Swit_1420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1420 
Symbol 
ID5199426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1559471 
End bp1559872 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content67% 
IMG OID640580966 
Producthypothetical protein 
Protein accessionYP_001261922 
Protein GI148554340 
COG category[S] Function unknown 
COG ID[COG3824] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0373567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAG GTCAAACCCT GGCGCCCGGC GCCGACCGGA TCGAGGCGAT CGCGCGCGCG 
ACGATCGCGA AGCTGCCGCC CGCCTTCGCC CGCCACCTGG GCGACGTCGT CCTGAAGATC
GAGGAATTCG CCGACGACGC CACCCTCGAC GAGATGGGGA TCGAGAATCC GTTCGAGCTG
ACCGGCCTCT ACACCGGCCT GCCGATCGGC GCGAAGTCGG TCGATCATTC GGGGACGATG
CCCGACATGA TCCACCTGTT CCGCCGCGCG ATCCTCGACG AATGGGTCGA GACCGGCGTC
ACGCTGGAGG CGCTGGTCGC GCATGTCGTG ATCCACGAGA TCGGTCATCA TTTCGGCCTG
TCCGACGCCG ACATGCACGC GCTCGAGGAG ATGGCCGGCT GA
 
Protein sequence
MNEGQTLAPG ADRIEAIARA TIAKLPPAFA RHLGDVVLKI EEFADDATLD EMGIENPFEL 
TGLYTGLPIG AKSVDHSGTM PDMIHLFRRA ILDEWVETGV TLEALVAHVV IHEIGHHFGL
SDADMHALEE MAG