| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1409 |
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| Symbol | argD |
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| ID | 5197673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1550127 |
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| End bp | 1551317 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640580955 |
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| Product | acetylornithine transaminase protein |
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| Protein accession | YP_001261911 |
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| Protein GI | 148554329 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.111439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.291313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCA CCCCGCTCAT GCCGGTTTAT CCGCGGTGCG GCGTGCGTCC GGTACGAGGC
GAAGGCTGCT ACCTGATCGG CGAGCGCGGC GAGCGCTATC TGGACTTCGC CAGCGGCATC
GCGGTCAATA TCCTCGGCCA TGGCCATCCC GATCTGGTCA AGGCGATCGC CGACCAGGCG
GCGACGCTGA TGCACACCTC GAACCTCTAC GGCAGCCCGC AGGGCGAGGC TTTCGCCCAG
AAGCTGGTCG ACAAGACCTT CGCCGACACG GTGTTCTTCA CCAATTCGGG CGCCGAGGCG
GTCGAGTGCG CGATCAAGAC CGCGCGCCGC TACCATTATG TCAACGGCAG CCCGGAGCGG
ACCAAGATCA TCAGCTTCTC GAACGCCTTC CACGGGCGGA CGCTGGGCAC GATCTCGGCC
ACCAGCCAGC CCAAGATGCG CGACGGCTTC GAGCCGCTGC TGCCGGGTTT CCAGGTGGTG
CCGTTCAACG ATCTCGAAGC GGCGCGGGCG GCGGTCGACG CCACCACCGC CGGCTTCCTG
GTCGAGCCGG TGCAGGGCGA GGGCGGCATG ACCCCGTCGA AGCCCGAATT CCTCAAGGGC
CTGCGCCAGA TCTGCGACGA GCAGGGGCTG CTGCTGATCC TCGACGAGGT GCAGTGCGGC
TATTGCCGGA CCGGCACCTT CTTCGCGCAT GAGCAGTACG GCATCACGCC GGACATCATG
GCGGTGGCCA AGGGCATCGC CGGCGGCTTC CCGCTGGGCG CCTGCCTCGC CACCGAGGAA
GCGGCCAAGG GCATGGTGTT CGGCACCCAT GGCTCGACCT ATGGCGGCAA TCCGCTCGCC
ATGGCGGCGG GCGAGGCGGT GTTCAAGGTC GCGGTCAACG ACGAGTTCCT CGCCAATGTC
CGCGCGACCG GCGATCGGCT GCGCCAGGCG ATCGAGCAGC TCATCCCCAA CCATGACGGC
GTGTTCGACA GCGTCCGCGG CCTCGGCCTG ATGATCGGCA TCAAGCTGAA GGACGCGGTC
GAGGCGCGCG CCTTCGTCGC GCATCTGCGC GACCATCACG GGCTGCTGAC GGTGGCGGCG
GGCGAGAATG TCGTCCGCAT CCTGCCGCCG CTGGTGATCG AGGAAAGCCA CATCGCCGAG
TGCATCGAGA AGCTCTCGGC CGGCGCGCGG ACCTACGAGC CCTCGGCGTG A
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| Protein sequence | MTITPLMPVY PRCGVRPVRG EGCYLIGERG ERYLDFASGI AVNILGHGHP DLVKAIADQA
ATLMHTSNLY GSPQGEAFAQ KLVDKTFADT VFFTNSGAEA VECAIKTARR YHYVNGSPER
TKIISFSNAF HGRTLGTISA TSQPKMRDGF EPLLPGFQVV PFNDLEAARA AVDATTAGFL
VEPVQGEGGM TPSKPEFLKG LRQICDEQGL LLILDEVQCG YCRTGTFFAH EQYGITPDIM
AVAKGIAGGF PLGACLATEE AAKGMVFGTH GSTYGGNPLA MAAGEAVFKV AVNDEFLANV
RATGDRLRQA IEQLIPNHDG VFDSVRGLGL MIGIKLKDAV EARAFVAHLR DHHGLLTVAA
GENVVRILPP LVIEESHIAE CIEKLSAGAR TYEPSA
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