| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1405 |
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| Symbol | |
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| ID | 5198599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1546621 |
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| End bp | 1547403 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640580951 |
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| Product | 20S proteasome, A and B subunits |
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| Protein accession | YP_001261907 |
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| Protein GI | 148554325 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3484] Predicted proteasome-type protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.372118 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCTATT GCGTAGGGAT AATGCTCCGC GAGGGGCTGA TCATGATCGC CGATACCCGC
ACCAATGCGG GGATCGACAA TATCTCCACC TATCGGAAGC TCCACATCCT GGCCGAGAGC
GAGGGCCGGC TCGTCGTCGC TGCAAGCGCG GGCAACCTGT CGGTGACCCA ACTCGTCCTC
GGCATGCTGG CCGAGGGCCT GCCCGCGACC AATCCCGACG AGGGGCCCCG CCGGATCGAG
GACATGCCGA GCATGTTCCA GGCCGCGCAG CTCGTCGGCG AGGCGGTGAT GGCCGCCGGC
GCCCAGCTCA AGCCCGCGCT TTACGCGGCG GGCGTGTCGT CGGGCATATC GCTGCTGCTC
GGCGGGCGGA TCGGCGGCGG GCCGCTCAAG CTGTTCCTGA TCTACGATGC CGGCAACTTC
ATCGAGTGCC AGCGCGACAG CCCGTTCTTC CAGATCGGCG CCTGCCAGTA CGGCAAGCCG
ATCCTCGACC GCGCGATGAA CTATGACAGC ACCCTCGACG AGGCGGTGAA GGTCGGCCTG
CTGTCGTTCG ATTCGACGAT CCGATCCGAC CTGTCGGTCG GCCTGCCGTT CGACCTGATG
GTGATGCGCG CCGATCCCAA GACCCCCGTG ATCCGGCGCC GGATCGAGGA GGACGATCCC
TATTTCCGCA ACCTGTCGGC CCGCTGGTCC ATGCTGCTCA ACGAATCGCG CGCCGCGATC
CCCGACCCGC CCTTCCTGAA CGGCGACGCC TCGGTGGTCG AGTTGAAGGC GACGGAACGA
TAA
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| Protein sequence | MTYCVGIMLR EGLIMIADTR TNAGIDNIST YRKLHILAES EGRLVVAASA GNLSVTQLVL
GMLAEGLPAT NPDEGPRRIE DMPSMFQAAQ LVGEAVMAAG AQLKPALYAA GVSSGISLLL
GGRIGGGPLK LFLIYDAGNF IECQRDSPFF QIGACQYGKP ILDRAMNYDS TLDEAVKVGL
LSFDSTIRSD LSVGLPFDLM VMRADPKTPV IRRRIEEDDP YFRNLSARWS MLLNESRAAI
PDPPFLNGDA SVVELKATER
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