Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1401 |
Symbol | |
ID | 5198100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 1543403 |
End bp | 1544074 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640580947 |
Product | lipoate-protein ligase B |
Protein accession | YP_001261903 |
Protein GI | 148554321 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0321] Lipoate-protein ligase B |
TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.482656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.150956 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTGG ACGACGACAT CGAATGGCGG GTGACCCCCG GCCTCTCCCC CTATGCCGAG ACGGTGGCGG AGATGGAGGC GCGCGCCGCC GCGATCCGCG CTGGCGAGGC GCGCGAGCTG ATCTGGCTGC TCGAGCACCC CCCGCTCTAC ACCGCCGGCA CCAGCGCCGA GGCGGACGAG CTGCTGCTGC CCGATCGCTT CCCGGTGTTC CGATCGGGGC GCGGCGGGCG CTACACCTAT CACGGTCCCG GCCAGCGGGT CGGCTATGTG CTGCTCGATC TCGACAGGCG CGGGCGCGAC GTGCGCTGCT TCGTCGCGGC GATCGAGAAT TGGGTGATCG CGACGCTGGG CGATTTCGGC ATCGCCGGCC GCAGCGAGCC GGGCCGGGTC GGCATCTGGA CCGGCCACGG CCCCGACGAG GCGAAGATCG GCGCGATCGG CGTCCGGGTC CGCCGCTGGG TCAGCTTCCA CGGCTTCTCG CTCAACGTCG ATCCGGACCT GTCGCATTTC TCGGGGATCG TGCCGTGCGG GCTGGGCGAA TTCGCCGTGA CCAGCATGGC GCGGCTGGGC ATCCCGGCCG AGATGGCGGC GGTCGACGCC GCGCTGCGCC GCCACTTCCC GGCGATGCTG GCGGGCCTGC GTTGCTCGAC GCGATCTGAC AAGGACTCTT GA
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Protein sequence | MTVDDDIEWR VTPGLSPYAE TVAEMEARAA AIRAGEAREL IWLLEHPPLY TAGTSAEADE LLLPDRFPVF RSGRGGRYTY HGPGQRVGYV LLDLDRRGRD VRCFVAAIEN WVIATLGDFG IAGRSEPGRV GIWTGHGPDE AKIGAIGVRV RRWVSFHGFS LNVDPDLSHF SGIVPCGLGE FAVTSMARLG IPAEMAAVDA ALRRHFPAML AGLRCSTRSD KDS
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