| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1401 |
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| Symbol | |
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| ID | 5198100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1543403 |
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| End bp | 1544074 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640580947 |
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| Product | lipoate-protein ligase B |
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| Protein accession | YP_001261903 |
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| Protein GI | 148554321 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0321] Lipoate-protein ligase B |
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| TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.482656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.150956 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGTGG ACGACGACAT CGAATGGCGG GTGACCCCCG GCCTCTCCCC CTATGCCGAG
ACGGTGGCGG AGATGGAGGC GCGCGCCGCC GCGATCCGCG CTGGCGAGGC GCGCGAGCTG
ATCTGGCTGC TCGAGCACCC CCCGCTCTAC ACCGCCGGCA CCAGCGCCGA GGCGGACGAG
CTGCTGCTGC CCGATCGCTT CCCGGTGTTC CGATCGGGGC GCGGCGGGCG CTACACCTAT
CACGGTCCCG GCCAGCGGGT CGGCTATGTG CTGCTCGATC TCGACAGGCG CGGGCGCGAC
GTGCGCTGCT TCGTCGCGGC GATCGAGAAT TGGGTGATCG CGACGCTGGG CGATTTCGGC
ATCGCCGGCC GCAGCGAGCC GGGCCGGGTC GGCATCTGGA CCGGCCACGG CCCCGACGAG
GCGAAGATCG GCGCGATCGG CGTCCGGGTC CGCCGCTGGG TCAGCTTCCA CGGCTTCTCG
CTCAACGTCG ATCCGGACCT GTCGCATTTC TCGGGGATCG TGCCGTGCGG GCTGGGCGAA
TTCGCCGTGA CCAGCATGGC GCGGCTGGGC ATCCCGGCCG AGATGGCGGC GGTCGACGCC
GCGCTGCGCC GCCACTTCCC GGCGATGCTG GCGGGCCTGC GTTGCTCGAC GCGATCTGAC
AAGGACTCTT GA
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| Protein sequence | MTVDDDIEWR VTPGLSPYAE TVAEMEARAA AIRAGEAREL IWLLEHPPLY TAGTSAEADE
LLLPDRFPVF RSGRGGRYTY HGPGQRVGYV LLDLDRRGRD VRCFVAAIEN WVIATLGDFG
IAGRSEPGRV GIWTGHGPDE AKIGAIGVRV RRWVSFHGFS LNVDPDLSHF SGIVPCGLGE
FAVTSMARLG IPAEMAAVDA ALRRHFPAML AGLRCSTRSD KDS
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