Gene Swit_1393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1393 
Symbol 
ID5198765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1536758 
End bp1537621 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content72% 
IMG OID640580939 
Productmethylthioadenosine phosphorylase 
Protein accessionYP_001261895 
Protein GI148554313 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0005] Purine nucleoside phosphorylase 
TIGRFAM ID[TIGR01694] 5'-deoxy-5'-methylthioadenosine phosphorylase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.249503 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGCA ACCGTCTCGG CCTGATCGGG GGCAGCGGGC TCTATCGGAT GCCGGCGCTG 
TCGGACGGCG AATGGATCGC GGTCGACACC GCCTGGGGGC CGCCATCGGA CTCGCTGCTG
CTCGGCACGA TCGCGGGCCG CGAGGTGGCG TTCCTGCCGC GCCACGGCCG GGGCCACCGC
ATCGCCCCGC ATGAGGTCAA CTACCGCGCC AATATCGCCG CGCTGAAGGC GGCGGGCTGC
ACCGAGATAC TGGCGGTGTC GGCGGTCGGC GGCTTCCACG GGGACGTGCC GCCGGGCAGC
TTCGTGCTGG TCGACCAATA TGTCGACCGC ACGATCCGTG GCGGGCGCAG CTTCTTCGGT
GACGGCATCG TCGCCCACGC CGCCTTCGGC CACCCGACCT GCTCGCGCCT CGGCGCGGTC
GTGGCCGGCG CGCTGGCGGA AGAGGGCGGG CCCCACAGGA TCGGCGGCAC GATGCTGGTG
ATCGAAGGGC CGCAATTCTC GACCCGCGCT GAATCGCTGC TGCACAAGGG GTGGGGGTGC
GACGTCGTCG GCATGACCGG CCTGCCCGAG GCGCGCCTCG CCCGCGAGGC CGAGCTTTGC
TATGCCAGCG TCGCGATGGT GACCGACGAC GACGCCTGGT CGGACACCCA TGTCGACGTC
GCCTCGGTGA TCGCGATCAT GGAGGCCAAT GTCGCCCGCG CCCAGGCGCT GGTGGAGGCG
GTCGCGGCCG GGACGCAAGG CGGCACCCAT TGCCCGCAGG GCTGCGACCA TGCGCTCGAC
GGCGCGGTGA TCACGGCGCC TTCCGCCTGG CCCGCCGCGA CGAAACGGCG GCTGGCGACG
CTGCTGCCCC GGTTGTTCGG ATGA
 
Protein sequence
MISNRLGLIG GSGLYRMPAL SDGEWIAVDT AWGPPSDSLL LGTIAGREVA FLPRHGRGHR 
IAPHEVNYRA NIAALKAAGC TEILAVSAVG GFHGDVPPGS FVLVDQYVDR TIRGGRSFFG
DGIVAHAAFG HPTCSRLGAV VAGALAEEGG PHRIGGTMLV IEGPQFSTRA ESLLHKGWGC
DVVGMTGLPE ARLAREAELC YASVAMVTDD DAWSDTHVDV ASVIAIMEAN VARAQALVEA
VAAGTQGGTH CPQGCDHALD GAVITAPSAW PAATKRRLAT LLPRLFG