Gene Swit_1390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1390 
Symbol 
ID5197530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1535201 
End bp1535653 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content65% 
IMG OID640580936 
Productdehydratase 
Protein accessionYP_001261892 
Protein GI148554310 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.143554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTATT TCGAGGATTA TCAGGAAGGC CAGGTCGAGC GCTTCGGCGC CTATCCGGTG 
ACCCGCGAGG AGGTGATCGA ATTCGCCTCC AAATATGATC CGCAGCCCTT CCATCTCGAC
GACGAAGCCG CCGCGCAGAG CGCGATCTTC GGCCGGCTGG CGGCGAGCGG CTGGCATAGC
TGCGCGATGC TGATGCGCAT GCTGACCGAC CACTGGACCG AAGACGGCTA TTTCTCGCTC
GGCGGGACCG GCGTCGACGA GCTGCGGTGG ACCAAGCCGG TCTATCCGGG CGATACGCTG
AGCATCGAGG CGGAGGTGCT GTCGAAGAGC ACGCCGCGCT CGCGCCCGAC CATGGGCTTC
GTCACCTTCC GGCTGACCGT GTTCAACCAG CATGGCGACG TCGTCATGAC CCTGAAGGTC
ACCAACATCC AGCATCGCCG GCCCGCCGCC TGA
 
Protein sequence
MRYFEDYQEG QVERFGAYPV TREEVIEFAS KYDPQPFHLD DEAAAQSAIF GRLAASGWHS 
CAMLMRMLTD HWTEDGYFSL GGTGVDELRW TKPVYPGDTL SIEAEVLSKS TPRSRPTMGF
VTFRLTVFNQ HGDVVMTLKV TNIQHRRPAA