| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1379 |
|---|
| Symbol | |
|---|
| ID | 5198826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 1521344 |
|---|
| End bp | 1521733 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640580925 |
|---|
| Product | 3-demethylubiquinone-9 3-methyltransferase |
|---|
| Protein accession | YP_001261881 |
|---|
| Protein GI | 148554299 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3865] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0500837 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGTCA CTCCCTTCCT GATGTTCCAG GGCGATGCCG AGGCCGCGAT CGATTTCTAC
CGAGGGCTCT TCCCCGAATT CGAAGTGGTC GAGCTGACCC GCTGGGGCGC GGAGGGCCCC
GGCAAGGAAG GCTCCATCTA TCAGGCGAGC CTCTCGATCG CCGGGCAGAC GGTCCGCTGC
TTCGACAGCC CGCCGGTCCA CGACTTCGGC TTCACGCCCT CCTTCTCCTT CTTCATCGAC
TGCGACGACG AAGCGCAGAT CGAGGCGCTG TGGGCGGCGC TGTCCGACGG CGGCAAGGCG
CTGATGGGGA TCGGCGACCA TGGCTTCAGC CGGCGCTTCG GCTGGGTTCA GGATCGCTTC
GGAATCTCCT GGCAGCTCAA TCTGCCCTGA
|
|---|
| Protein sequence | MQVTPFLMFQ GDAEAAIDFY RGLFPEFEVV ELTRWGAEGP GKEGSIYQAS LSIAGQTVRC
FDSPPVHDFG FTPSFSFFID CDDEAQIEAL WAALSDGGKA LMGIGDHGFS RRFGWVQDRF
GISWQLNLP
|
|---|
| |