Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1377 |
Symbol | |
ID | 5198824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 1519979 |
End bp | 1520602 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640580923 |
Product | 50S ribosomal protein L25/general stress protein Ctc |
Protein accession | YP_001261879 |
Protein GI | 148554297 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0448782 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAG TGCTCGACCT GTCGGCCGAG GCACGCGAGC GGGCTGGCAA GGGAGCCTCC CGCGCGATCC GCCGCGAAGG CCGCGTCCCC GCCGTGATCT ACGGCGAAAA GCAGGAACCC GCCTCGATTC ACGTCGAGGA GAAGGTCCTC ATGAAGCTGC TGCACACCGG CCACTTCTTC AACAGCGTGG TCATGCTCGA TGTCGGCGGC AAGAAGGTCC GGACCCTGCC GAAGGACGTC CAGTTCCATC CGGTCACCGA CCGTCCGCTG CATGTCGACT TCCTGCGCAT CGGCGAACAC ACCAAGGTCA ACGTCAACGT TCCGGTCCAC TTCAAGGACG AGGAACTGTC GCCGGGCCTG AAGCGTGGCG GCGTTCTCAA CGTCGTCATC CATGACCTGG GCCTGTCGGT CGACGCGGCC GAGATCCCGG AGGAGATCGT GATCTCGCTG AAGGGTCTCG AGGTGGGCGA GAGCATCCAC CTGTCGCAGG TCGCCCTGCC CAAGGGCGCG TCCGCGCAGG ACCATGAAGA CATCACCATC GCGACGATCG TCGCCCCGTC GGCGCTGAAG AGCGCCGAGG GCGAGGAAGC CGCCGAAGCC GGTGAAGAGG CCGCCGAGGG CTGA
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Protein sequence | MSEVLDLSAE ARERAGKGAS RAIRREGRVP AVIYGEKQEP ASIHVEEKVL MKLLHTGHFF NSVVMLDVGG KKVRTLPKDV QFHPVTDRPL HVDFLRIGEH TKVNVNVPVH FKDEELSPGL KRGGVLNVVI HDLGLSVDAA EIPEEIVISL KGLEVGESIH LSQVALPKGA SAQDHEDITI ATIVAPSALK SAEGEEAAEA GEEAAEG
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