| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1375 |
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| Symbol | |
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| ID | 5200677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1518253 |
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| End bp | 1519170 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640580921 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001261877 |
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| Protein GI | 148554295 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0970899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATCCGC TCAGCGACAT CATCGCCCTC CTCCGTCCCC ACGCCGCCCT CTCCAAGCCG
ATCAGCGGCC GGGGCGATTG GGGCGTGCGC TATGACGCCT ATGGCCAACC CGGCTTCGCG
ATGGTGCTGG CCGGGCATTG CTGGCTGACG CTCGACGGCG CCGAACCGGT CCGCCTCGAC
CGGGGCGACT TCGTGTTGCT GCCCGCCACC CCCGCCTTCA CCCTCGCCAG CCGCCCGGGG
ATCGCCGGCC CCCTCGTCCA GCCGTCGGAC CGGGCGGTCC GTCATGGCGA GCCCGACGGC
GCCCCCGATG TCGAGATGCT GGGCGGCGCC TTCCGCATCG AACCGGTCAA CGCACCGCTG
CTGCTGGCCC TGTTGCCCGG CATGATCCAC ATACGCGCCG CCGAGAGTGC CGCCGACCGG
CTGTCGCGGA TCATCGCCCT GATCGCCGAG GAATGCGGCG GGGATCGACC GGGGCACGAC
ATGATCCTGC CCCGGCTGAT CGAGGTGATG CTGATCGAAT GTCTGCGCGG GAGCGGGATC
GAGGGCAAGG CGCTCCCTTC CGGCCTGTTG GCGGGCCTGC GCGATCCGGC GCTCGCCACC
GCCTTGCGGG CGATCCACGG CAACGTTCGC GGCGGCTGGA GCGTGGCCGG GCTCGCCGCG
ATCGCCGGCA TGTCGCGATC GGCCTTCGCC GCCCGCTTCG TCGAGACGCT GGGCTGCGGC
CCGATCGAAT ATCTGGCGCG GTGGCGGATG GCGCTGGCGC GCGACGCGCT CGATCGCGGC
AAAATCCCGC TCGACCGGCT CGCGGAGACG ATCGGCTATG AATCGGCCAG CGCCTTCAGC
ACCGCCTTCC GCCGCCGCAT GGGTTGCTCG CCAGGCGCCT TCGCCCGCGC CCGTCGTCAG
TCCGCCATAG CGGCCTGA
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| Protein sequence | MDPLSDIIAL LRPHAALSKP ISGRGDWGVR YDAYGQPGFA MVLAGHCWLT LDGAEPVRLD
RGDFVLLPAT PAFTLASRPG IAGPLVQPSD RAVRHGEPDG APDVEMLGGA FRIEPVNAPL
LLALLPGMIH IRAAESAADR LSRIIALIAE ECGGDRPGHD MILPRLIEVM LIECLRGSGI
EGKALPSGLL AGLRDPALAT ALRAIHGNVR GGWSVAGLAA IAGMSRSAFA ARFVETLGCG
PIEYLARWRM ALARDALDRG KIPLDRLAET IGYESASAFS TAFRRRMGCS PGAFARARRQ
SAIAA
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