Gene Swit_1369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1369 
Symbol 
ID5200702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1515057 
End bp1515428 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content62% 
IMG OID640580916 
Producthypothetical protein 
Protein accessionYP_001261872 
Protein GI148554290 
COG category[S] Function unknown 
COG ID[COG2361] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.150444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.253004 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGATC GCAAGCTGGC CCATGAGCTG GAGACGATCG AGCTTCTCGT CGCACGTGCG 
CGGGAAACTG TCGGCAAGCA CGATAGGCGC AGCTTCGCAG AGGATCGAGA CGCGGTAGAT
GCCACCGCCT ATCGGCTGGC GATGATCGGC GAGCATTGCA AGCGATTGCC GCCCGATCTG
CAGGAGAGGC ATCCGAACCT GCCATGGCGG CAAATGGTTG GGCTGCGCAA CATCGTCAGC
CACGCCTATG ACGAAATCGA TACCGGGATC ATATGGTCTG CCGCCACGGC CAGACTGGAT
GAAATCGGCA GAATGTGCCG GGACGAGAAA AGGCGTCTCG ATCCTGAGGG CTCGCGCGAA
GGCGGCGCGT AG
 
Protein sequence
MDDRKLAHEL ETIELLVARA RETVGKHDRR SFAEDRDAVD ATAYRLAMIG EHCKRLPPDL 
QERHPNLPWR QMVGLRNIVS HAYDEIDTGI IWSAATARLD EIGRMCRDEK RRLDPEGSRE
GGA