Gene Swit_1367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1367 
Symbol 
ID5200700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1513111 
End bp1514442 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content71% 
IMG OID640580914 
Productpyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 
Protein accessionYP_001261870 
Protein GI148554288 
COG category[C] Energy production and conversion 
COG ID[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 
TIGRFAM ID[TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0790838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.295177 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATCG AGTTGAAGAT GCCCGCCCTT TCTCCGACGA TGGAGGAAGG TACTCTCGCC 
AAATGGCTCG TCAAGGAAGG GGATGCGGTC AAGTCCGGCG ATCTCCTCGC CGAGATCGAG
ACCGACAAGG CGACGATGGA GTTCGAAGCC GTCGACGAAG GCACGATCGC CAAGCTCGTC
GTCGGCGAGG GCACCGAGGG CGTCAAGGTC GGTTCGGTGA TCGCGCTGAT CCAGGGCGAG
GACGAGGATG CGGCGCCCAA GGCCGCCCCG AAGGTCGAGG CCGCGCCCAA GCCGGAACCG
AAGCCCGCTC CCGCGCCGAA GGCCGAAGCG CCGGCTCCCA AGGCCGAGGC GCCCGCCAGG
CCGGCCGCGC CCGCCGCGGC ACCGGCCGCC TCGGGCGACC GGGTGAAGGC GAGCCCGCTC
GCGCGCCGGC TCGCCCAGGC GCAGGGCGTC GACCTGGCCC AGGTCAGCGG CACCGGCCCT
GGCGGCCGGG TGGTGAAGGC CGATCTCGAC GGCGCCCCGA AGGCCGCCGC CGCTCCGGCC
CAGGCGCCTG CCGCTGCCGC TGCCGCGGCT CCCGCGCCGA CCGCCGCTCC CGCCGCGGCG
CCCAAGCCCG CCGCCGCGCC GGCGCCGGCC GGTCCGGACG AGATCCCGCA CGAGGTCGTC
AAGCTGTCGA ACATGCGCAA GGTGATCGCG CGGCGGCTGA CCGAATCGAT GCAGCAGAGC
CCGCACATCT TCCTGACGGT CGACATCCGG CTCGATCCGC TGCTCAAGCT GCGCGGCGAG
CTCAACGCGT CGCTGGAGGC GCGCGGCGTC AAGCTGTCGG TCAACGACCT GCTGATCAAG
GCGCTCGCGG CCGCGCTGAT GGACGTGCCC GATTGCAACG TCTCCTTCGC CGGCGACACG
CTGATCCAGT ACAAGCGCGC CGACATCTCG GTGGCGGTGG CGATCCCGGG CGGCCTGATC
ACCCCGATCA TCAAGGGCGC CGACACCAAG AGCGTCGGCG CGATCGCGAC CGAGGCGAAG
GACCTCGCCC AGCGCGCCAA GGAGGGCAAG CTCCAGCCGC ACGAATATCA GGGCGGCACG
GCGTCGATCT CGAACATGGG GATGTTCGGG ATCAAGCAGT TCACCGCGGT GATCAACCCG
CCCCAGGCGA TGATCATGGC GGTCGGCGCG GGCGAGAAGC GGCCCTATGT GGTCGACGAT
GCGCTGGCGA CGGCGACGGT CATGTCGGCC ACCGGCAGCT TCGACCATCG CGCCATCGAC
GGCGCGGTCG GCGCGCAGCT GATGCAGGCG TTCAAGCGGC TGGTCGAAAA CCCGCTCGGC
CTGCTGGCTT GA
 
Protein sequence
MPIELKMPAL SPTMEEGTLA KWLVKEGDAV KSGDLLAEIE TDKATMEFEA VDEGTIAKLV 
VGEGTEGVKV GSVIALIQGE DEDAAPKAAP KVEAAPKPEP KPAPAPKAEA PAPKAEAPAR
PAAPAAAPAA SGDRVKASPL ARRLAQAQGV DLAQVSGTGP GGRVVKADLD GAPKAAAAPA
QAPAAAAAAA PAPTAAPAAA PKPAAAPAPA GPDEIPHEVV KLSNMRKVIA RRLTESMQQS
PHIFLTVDIR LDPLLKLRGE LNASLEARGV KLSVNDLLIK ALAAALMDVP DCNVSFAGDT
LIQYKRADIS VAVAIPGGLI TPIIKGADTK SVGAIATEAK DLAQRAKEGK LQPHEYQGGT
ASISNMGMFG IKQFTAVINP PQAMIMAVGA GEKRPYVVDD ALATATVMSA TGSFDHRAID
GAVGAQLMQA FKRLVENPLG LLA