Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1358 |
Symbol | rpsL |
ID | 5200807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1505708 |
End bp | 1506079 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640580905 |
Product | 30S ribosomal protein S12 |
Protein accession | YP_001261861 |
Protein GI | 148554279 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0048] Ribosomal protein S12 |
TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.179796 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.150246 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACGA TCAACCAGCT GATCCGCAAG GGTCGCGAAC CGCAGAAGGC CAAGTCGAAG GTCCCTGCGA TGGAAAAGAA CCCGCAGAAG CGCGGCGTTT GCACGCGCGT CTACACGACG ACCCCGAAGA AGCCGAACTC GGCGCTGCGC AAGGTGGCCA AGGTCCGCCT GACCAACAGC CGCGAAGTGA TCAGCTACAT TCCGGGCGAA GGCCACAACC TCCAGGAGCA CTCGGTGGTC CTGATCCGCG GCGGCCGTGT GCGCGACCTT CCGGGCGTGC GCTATCACGT TCTCCGCGGC GTGCTCGACA CGCAGGGTGT CAAGGATCGC AAGCAGAGCC GTTCGAAGTA CGGCGCCAAG CGTCCCAAGT AA
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Protein sequence | MPTINQLIRK GREPQKAKSK VPAMEKNPQK RGVCTRVYTT TPKKPNSALR KVAKVRLTNS REVISYIPGE GHNLQEHSVV LIRGGRVRDL PGVRYHVLRG VLDTQGVKDR KQSRSKYGAK RPK
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