| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1348 |
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| Symbol | rplV |
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| ID | 5200640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1497884 |
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| End bp | 1498267 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640580895 |
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| Product | 50S ribosomal protein L22 |
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| Protein accession | YP_001261851 |
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| Protein GI | 148554269 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0091] Ribosomal protein L22 |
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| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0388606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGAAGC CCGCAGCTCC CCGTCGGGTC GGTGAGAAGG AGGCCCTCGC GGTCGCCACC
ACCGTTCGCG GCAGCCCGTA CAAGCTCAAC CTGGTCGCGG GCCTGATCCG CGGCAAGAAG
GCCGGCGACG CGCTCAACAT CCTGACCTTC TCGAAGAAGG CGATGGCTGT CGACGTCCGC
AAGGTGCTCG CCTCGGCGAT TGCCAATGCC GAGAACAACC ACAACCTCGA CGTCGACGCG
CTCGTCGTGA AGGAGGCTTC GGTCGGCAAG TCGATCGTCA TGAAGCGCTT CGCCACCCGC
GGCCGCGGCA AGTCGACCCG CATCATCAAG CCGTTCGCGC GCCTTCGGGT CGTCGTTCGC
GAGCAGCAGG AAGAGGCTGA ATAA
|
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| Protein sequence | MSKPAAPRRV GEKEALAVAT TVRGSPYKLN LVAGLIRGKK AGDALNILTF SKKAMAVDVR
KVLASAIANA ENNHNLDVDA LVVKEASVGK SIVMKRFATR GRGKSTRIIK PFARLRVVVR
EQQEEAE
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