| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1347 |
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| Symbol | rpsC |
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| ID | 5200639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1497187 |
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| End bp | 1497882 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640580894 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_001261850 |
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| Protein GI | 148554268 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0422213 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTCAGA AGTCCAACCC GATCGGCATG CGGTTGCAGA TCAACCGCAC CTGGGACAGC
CGCTGGTATG CCGACGGCGC CGATTACGGC CGTCTGCTGC TCGAGGATCT CAAGATCCGC
AAGCACATCA TGAAGGCGAT CCCGCAGGCC GCGATCTCGA AGGTCGTGAT CGAGCGTCCG
GCCAAGCTGT GCCGCATCTC GGTCTATGCC GCGCGCCCGG GCGTCATCAT CGGCAAGAAG
GGCGCCGACA TCGAGAAGCT TCGCCGCGCG CTCGGCAAGA TGACCTCGTC GGACGTGTCG
CTGAACATCG TCGAGATCCG CAAGCCGGAG ATCGACTCGA AGCTCGTCGC CCAGGGCGTC
GCCGACCAGC TCGAGCGCCG CATCGCCTTC CGCCGCGCGA TGAAGCGCGC GGTGCAGTCG
GCCCTGCGTC TCGGCGCCGA GGGCATCCGC ATCACCTGCG CCGGCCGTCT GGGCGGCGCG
GAGATCGCCC GCACCGAGTG GTATCGCGAA GGCCGCGTTC CGCTGCACAC GCTGCGCGCG
AACGTCGACT ATGCCGAAGC CGAAGCCCAC ACCGCTTATG GTGTGTGCGG CATCAAGGTC
TGGATCTTCA AGGGTGAGAT CCTCGGCCAT GATCCGCTGG CCCAGGACCG GCTCATGATG
GAAGCTCAGA CGTCGGGGGT CCGGCCGGCG CGGTAA
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| Protein sequence | MGQKSNPIGM RLQINRTWDS RWYADGADYG RLLLEDLKIR KHIMKAIPQA AISKVVIERP
AKLCRISVYA ARPGVIIGKK GADIEKLRRA LGKMTSSDVS LNIVEIRKPE IDSKLVAQGV
ADQLERRIAF RRAMKRAVQS ALRLGAEGIR ITCAGRLGGA EIARTEWYRE GRVPLHTLRA
NVDYAEAEAH TAYGVCGIKV WIFKGEILGH DPLAQDRLMM EAQTSGVRPA R
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