| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1346 |
|---|
| Symbol | rplP |
|---|
| ID | 5200638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 1496692 |
|---|
| End bp | 1497123 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640580893 |
|---|
| Product | 50S ribosomal protein L16 |
|---|
| Protein accession | YP_001261849 |
|---|
| Protein GI | 148554267 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0197] Ribosomal protein L16/L10E |
|---|
| TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0763592 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCAAC CAAAGCGCAC CAAATTCCGC AAGGCCCACA AGGGCCGCAT CCATGGCAAC
GCGCCGGGCG GCGCGTCGCT GAACTTCGGC GCGTTCGGCC TCAAGGCCCT CGAGCCGGAC
CGGATCACCG CGCGCCAGAT CGAGGCGGCC CGCCGCGCGA TCACGCGTCA CATCAAGCGC
CAGGGTCGCT TGTGGATCCG GATCTTCCCG GACGTGCCCG TCTCGTCGAA GCCCGCCGAA
GTCCGCATGG GCTCGGGTAA GGGTTCGCCC GAGTTCTGGG CGGCTCGCGT CAAGCCCGGC
CGCATCCTGT TCGAGCTCGA CGGCGTTCCC GGCCCGCTCG CCCGCGTCGC CTTCGAGCGC
GCGATGGAGA AGCTGCCGAT CAAGACCAAG GTTGTCGCTC GCTTCGGCGA GTCGATCTAC
GAGGACAAGT AA
|
|---|
| Protein sequence | MLQPKRTKFR KAHKGRIHGN APGGASLNFG AFGLKALEPD RITARQIEAA RRAITRHIKR
QGRLWIRIFP DVPVSSKPAE VRMGSGKGSP EFWAARVKPG RILFELDGVP GPLARVAFER
AMEKLPIKTK VVARFGESIY EDK
|
|---|
| |