Gene Swit_1343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1343 
Symbol 
ID5200409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1495822 
End bp1496193 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content64% 
IMG OID640580890 
Product50S ribosomal protein MRPL14P 
Protein accessionYP_001261846 
Protein GI148554264 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0093] Ribosomal protein L14 
TIGRFAM ID[TIGR01067] ribosomal protein L14, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.140973 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCAGA TGCAGACGAA CCTCGACGTC GCCGACAACA GCGGCGCGAA GAGGGTGCAG 
TGCATCAAGG TGCTGGGCGG TTCCAAGCGC CGTTTCGCGA CCGTGGGCGA CGTGATCGTC
GTCTCGATCA AGGAAGCGGC GCCGCGCGGC AAGGTCAAGA AGGGTGACGT GCATCGCGCG
GTCATCGTGC GCACCGCCAA GGACATCCAT CGTCCCGACG GTTCGACGAT CCGTTTCGAC
GGCAACGCCG CCGTTCTGAT CAACAAGAAC AGCGGCGAGC CGATCGGCAC CCGCATCTTC
GGCCCGGTGG TCCGCGAGCT CCGTGCCAAG AACCACATGA AGATCATCTC GCTCGCCCCT
GAGGTGCTGT GA
 
Protein sequence
MIQMQTNLDV ADNSGAKRVQ CIKVLGGSKR RFATVGDVIV VSIKEAAPRG KVKKGDVHRA 
VIVRTAKDIH RPDGSTIRFD GNAAVLINKN SGEPIGTRIF GPVVRELRAK NHMKIISLAP
EVL