Gene Swit_1340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1340 
SymbolrpsN 
ID5200470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1494594 
End bp1494899 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content62% 
IMG OID640580887 
Product30S ribosomal protein S14 
Protein accessionYP_001261843 
Protein GI148554261 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0199] Ribosomal protein S14 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.843719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.149539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAAC TGAGTTCGAT CAACAAGAAC GAGCGTCGCA AGAAGCTGGT GAAGGCTTAT 
GCGGGCAAAT ATGCGCGCCT GAAGGCGATC GCGGACGACG AGAGCAAGGA CGAGACGGAG
CGCCTGATCG CGCGCCTCAA GCTCGCCGAG ATTCCGCGCA ACGCGAACCC GACCCGCGTG
CGCAACCGTT GCGAAGTGAC GGGCCGTCCC CGCGCTTATT ATCGCAAGTT CCGGCTTTGC
CGCGTGCAGC TCCGGGATCT GGCCAACAAG GGCCTGATCC CCGGCGTCAC CAAGTCGAGC
TGGTAA
 
Protein sequence
MAKLSSINKN ERRKKLVKAY AGKYARLKAI ADDESKDETE RLIARLKLAE IPRNANPTRV 
RNRCEVTGRP RAYYRKFRLC RVQLRDLANK GLIPGVTKSS W