| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1336 |
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| Symbol | rpsE |
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| ID | 5200466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1492577 |
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| End bp | 1493296 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640580883 |
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| Product | 30S ribosomal protein S5 |
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| Protein accession | YP_001261839 |
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| Protein GI | 148554257 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.159071 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACG AAACCGAAAT CCAGGCGGCC GCTCCGGCGG AAGCCGCTCC CGGTGCCGAG
GGCCAGGGCG AGCGCCGTGG CCGTGGCGGC CGTGGCCGTG GCGGAAACGA CCGCGGCGGC
GACCGTGGCC GTGGCCGTGA CGGCCGGGGC CGTCGCGACG ACCGTCGTGG CTCCGAGGAG
CAGGGCGAGG AGCTGATCGA GAAGCTCGTC CACATCAACC GCGTCTCGAA GACCGTGAAG
GGCGGCAAGC GCTTCGGCTT TGCCGCGCTG GTCGTGGTCG GCGACGGCAA GGGCCGCGCG
GGCTTCGGCC ACGGCAAGGC CCGCGAGGTG CCGGAGGCGA TCTCGAAGGC GACCGCCGCC
GCCAAGAAGG CGATGGTCCG CGTGCCGCTG CGCGAGGGCC GGACCCTGCA CCATGACGGC
AACGGCCACT TCGGCGCCGG CCGCGTGACG GTCCGCACCG CGCCTCCGGG CACCGGCATC
ATCGCCGGCG GTCCGATGCG CGCCATCTTC GAGAGCCTCG GCGTCGCCGA CGTGGTGACC
AAGTCGGTCG GCACCTCGAA CCCCTACAAC ATGATCCGGG CGACCTTCGA GGCGCTGAAG
GATCAGACCT CGCCCAAGTC GGTGTCGCAG CGCCGTGGCA AGAAGATCGC CGACCTGCTG
GGTCGCGGCG GTGCTTCGGC CCCGGTGGCC GAGGCCGAAG CCGCTGCGAT CACGGAGTAA
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| Protein sequence | MADETEIQAA APAEAAPGAE GQGERRGRGG RGRGGNDRGG DRGRGRDGRG RRDDRRGSEE
QGEELIEKLV HINRVSKTVK GGKRFGFAAL VVVGDGKGRA GFGHGKAREV PEAISKATAA
AKKAMVRVPL REGRTLHHDG NGHFGAGRVT VRTAPPGTGI IAGGPMRAIF ESLGVADVVT
KSVGTSNPYN MIRATFEALK DQTSPKSVSQ RRGKKIADLL GRGGASAPVA EAEAAAITE
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