| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1334 |
|---|
| Symbol | rplO |
|---|
| ID | 5200757 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 1491706 |
|---|
| End bp | 1492227 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640580881 |
|---|
| Product | 50S ribosomal protein L15 |
|---|
| Protein accession | YP_001261837 |
|---|
| Protein GI | 148554255 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0200] Ribosomal protein L15 |
|---|
| TIGRFAM ID | [TIGR01071] ribosomal protein L15, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.135432 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCA ACGAAATCCG CGACAACCAG GGCGCCCGCA AGAGCCGCGT CCGCGTCGGC
CGTGGCATCG GTTCCGGCCT GGGCAAGACC GGCGGCCGGG GCCAGAAGGG CCAGAAGAGC
CGCTCGGGCG TCTCGATCAA CGGCTTCGAG GGCGGTCAGA TGCCGCTCCA CATGCGCCTG
CCGAAGCGCG GCTTCAACAA CATCTTCGCC AAGGATTATG CCGAGGTGAA CCTGGGCGCG
ATCCAGAAGC TGGTCGACGC CAAGAAGCTC GACACCGCCG GCGTGATCGA CCACGCCGCG
CTGAAGGCGG CCGGCGTTGC CCGTGGCGGC AAGGACGGCG TCCGCATCCT CGGCAAGGGC
GAGCTGACCG CGAAGGTCTC GTTCAAGGTC GCCGGCGTTT CGGCCGGCGC CAAGGCGGCG
ATCGAGAAGG CGGGCGGTTC GGTCGAGGTG ATCGAGGTGG TTCCGGCCGC CGAGAAGGCC
GCCGCCAAGA AGGGCACCGC GAAGGCCGCC AAGAAGGCTT GA
|
|---|
| Protein sequence | MKLNEIRDNQ GARKSRVRVG RGIGSGLGKT GGRGQKGQKS RSGVSINGFE GGQMPLHMRL
PKRGFNNIFA KDYAEVNLGA IQKLVDAKKL DTAGVIDHAA LKAAGVARGG KDGVRILGKG
ELTAKVSFKV AGVSAGAKAA IEKAGGSVEV IEVVPAAEKA AAKKGTAKAA KKA
|
|---|
| |