| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1326 |
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| Symbol | |
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| ID | 5200694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1484324 |
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| End bp | 1485385 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640580873 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_001261829 |
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| Protein GI | 148554247 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.606485 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGTCA ACGCAAAGAA CTGGCAGGAA CTCAAGAAGC CGAACGGCCT CGAAAAGAAG
TCGGGCGGCG ATGGCAAGCG CAAGGCGACC TTCGTCGCCG AGCCGCTGGA GCGCGGCTTC
GGCCTGACGC TCGGCAACTC GCTGCGTCGC GTGCTGCTGT CCTCGCTGCA GGGCGCCGCC
GTCACCTCGA TCAAGATCGA GAACGTGCTG CACGAGTTCT CGAGCCTCGC GGGCGTTCGC
GAGGACGTCA CCGACATCGT CCTCAACGTC AAGCAGATCG CGCTCAAGAT GCAGGGCGAC
GGCCCCCGCC GCCTTCAGCT CTCGGCGACC GGCCCGGCCG AGGTCACCGC GGGCATGATC
GCTGCTTCGG GCGACATCGA GGTGATGAAC ACCGACCTGG TGATCTGCCA CCTCGACGAC
GGCGCGACCC TGAACATGGA ACTGACCGCC GACGTCGGCA AGGGCTATGT CACCGCCGCC
GCCAACCGTC CGGTCGACGC GCCGATCGGC CTGATCCCGG TCGATGCGCT CTACTCGCCG
GTCCGCCAGG TCGCCTACAA GGTCGAGAAC ACCCGCGTCG GTCAGGAGCT CGACTATGAC
AAGCTCACGC TGACGATCGA GACCGACGGC ACCGTCACGC CGGAAGACGC GCTGGCCTAT
TCGGCGCGCA TCCTGCAGGA CCAGCTCCAG CTCTTCGTCC ACTTCGACGA CGGCATGGCG
ATCTCGGCTC CGGCCGCGGG CGCCGGCGCC GCGGGCGGCG CTGCGGGCGA GCCGGAAGGC
GACGCCAACC AGCTCAACCG TTACCTGCTC AAGAAGGTCG ACGAGCTCGA GCTGTCGGTC
CGTTCGGCCA ACTGCCTCAA GAACGACAAC ATCATCTACA TCGGCGACCT GGTCCAGAAG
ACCGAGGCCG AGATGCTGCG CACGCCGAAC TTCGGCCGCA AGTCGCTCAA CGAGATCAAG
GAAGTCCTCG CTTCGATGGG CCTCCGCCTG GGCATGGAAA TCCCGGGCTG GCCGCCGGAG
AACATCGAGG AAATGGCCAA GAAGCTCGAA CAGGAGTTCT GA
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| Protein sequence | MAVNAKNWQE LKKPNGLEKK SGGDGKRKAT FVAEPLERGF GLTLGNSLRR VLLSSLQGAA
VTSIKIENVL HEFSSLAGVR EDVTDIVLNV KQIALKMQGD GPRRLQLSAT GPAEVTAGMI
AASGDIEVMN TDLVICHLDD GATLNMELTA DVGKGYVTAA ANRPVDAPIG LIPVDALYSP
VRQVAYKVEN TRVGQELDYD KLTLTIETDG TVTPEDALAY SARILQDQLQ LFVHFDDGMA
ISAPAAGAGA AGGAAGEPEG DANQLNRYLL KKVDELELSV RSANCLKNDN IIYIGDLVQK
TEAEMLRTPN FGRKSLNEIK EVLASMGLRL GMEIPGWPPE NIEEMAKKLE QEF
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