| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1314 |
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| Symbol | |
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| ID | 5200591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1470350 |
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| End bp | 1471096 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640580861 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001261817 |
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| Protein GI | 148554235 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.376649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCGTTCC GGCCAACAAT CCTTATCCCG CGCCCCATGA CCATCAACAT CCTCGCCACC
GGCACCAGCC GGGGCATCGG CAGGGCCATC GTCGACCGCT TCGCGGACGA GGACGTCCGC
ATCGTCGGCC ACCGCTCCAG CGACGGCGAC GACGACAGCA TCGCCGCCGA CCTTTCCGAC
CCGACCGCGC CGCGCCGCAT CTGGGACCAG GCGCTCGAGC GGCTCGGCGG CCGGATCGAC
GTGCTCGTCA ACAATGCCGG CATCTTCGAG GCCGCCTCGA TCGACGCGCC CGACATCGCC
TGGACCGAGG CGTGGAACCG GACGATGCAG GTCAACCTGA CCGCCGCCGC CGAGCTCTGC
CGCCTCGCCG TCCTGCATTT CCGGCGGCAC GGCGGCGGGC GCATCGTCAA TATCGCCAGT
CGCGCCGCCC ATCGCGGCGA CAGCCCGGCG CATTGGCATT ATGCCGCGTC CAAGGCCGGC
ATGGTGGCGA TGACCAAGAC GATCGCGCGC GGCTATGCGG CCGAGGGCAT CCTCGCCTTC
GCGGTCTGCC CCGGCTTCAC CGTCACCGGC ATGGCCGAGG ATTATCTGGC GAGCCGCGGC
GGCGACAAGC TGCTCGCCGA CATCCCGCTC GGCCGCGTCG CCGATCCGGC GGAGATCGCC
GAGACGGTCC GCTTCCTCGC GCTCGCCGCT CCGGCATCGA TGACGGGCGC GGTCCTCGAC
ATCAACGGAG CCAGCTATGT CCGCTAG
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| Protein sequence | MPFRPTILIP RPMTINILAT GTSRGIGRAI VDRFADEDVR IVGHRSSDGD DDSIAADLSD
PTAPRRIWDQ ALERLGGRID VLVNNAGIFE AASIDAPDIA WTEAWNRTMQ VNLTAAAELC
RLAVLHFRRH GGGRIVNIAS RAAHRGDSPA HWHYAASKAG MVAMTKTIAR GYAAEGILAF
AVCPGFTVTG MAEDYLASRG GDKLLADIPL GRVADPAEIA ETVRFLALAA PASMTGAVLD
INGASYVR
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