Gene Swit_1307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1307 
Symbol 
ID5200432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1463149 
End bp1464480 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content66% 
IMG OID640580854 
Producthypothetical protein 
Protein accessionYP_001261810 
Protein GI148554228 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.618243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGC GCCTGACGTC CGGACGGGCG GCGAGCGTGC TGCCGACCCA GGCGAGCATC 
GGCTGGCCGG CCACGTCGAT CAACGCCTTG AACGGCTGGC CGAAATGCTC CGCCAGCGGG
TCGCCGCCGG GGCGCTGGCC GGCCAGCAGG ATCACGGTAA AAGCCGAATT GATCATCATC
GTGCCTTGCC AGCCCAAGGC CGCGTCGGCA AGGAACGCCG ACGTCAACTC TCATATGGTG
ATCATGAACA TCAGTAGTGT ACCCGGCGTC CGATCGATCG GAACCAACCC GACGCCGATC
TGGGGCATGT CCAGTACCGA GCGGCTGCGG CGCATGGCCG CCGCCCAGAA GCTGCGGTAT
CGCGAGGAAA GCAACGGCCC CGTCCTGCTG GTCTCGGCCA GCCATGTGTT CGAACCCGCC
TGGCTGAAAT TCATGGTCGA CCGGCCGGGC CAGGTGCTGA CCCTCGACGG CGAGAAGGTG
ATCGCCCATC TCACCTCCGA CACGGGCGGC GGCTTTCCCG ACGGCCTCGA CGAGGTGCGG
GTCGAGGACA ACCGCGTCTT CTACAACGCC GCGCTGCGCA AGCGCGAGGA ACCGGTGATC
GCGAAGCTCG AGCCCGGCAC CGCCAAGGCG ATCGAGCGCA AGACCTATTT CGGCGCCTAT
AAGGGCGTCA CCGACATCCT CACCAAATAT CTGTGGCCCG AATGGGCGCT GGTGCTGACC
CGCCTGGCCG CGAAGATCGG CATGTCGCCC AACCAGGTGA CGGCGATCGG CGCGGCGCTG
TGCGTCCTCG CCACCTGGCT GTTCTGGATC GGCGAATATG GCTGGGGCAT GGCCGCGGGG
CTGGTCTTCA TGGTGCTCGA CACCGTCGAC GGCAAGCTCG CCCGCTGCAC CATCACCTCC
AGCGCGTGGG GCAACGTCTT CGACCATGGC GTCGACCTGG TCCATCCGCC CTTCTGGTGG
TGGGCCTGGG GCGTCGGCCT GTCGCATTGG GGATTGGCCT ATACCCATCT CGAATTCACG
CTGGTGATGA TCGCGATCGT CGGCGGCTAT GTCGTCCAGC GCGCGATCGA GGGCGCGTTC
ATCCGCCGCT TCAACGGCAT GCACATCCAT GTCTGGGAGA AGATCGACAG CGACTTCCGC
CTGATCACCG CGCGGCGCAA CCCGAACATG GTGATCCTGT TCGTCGCCAC GCTGTTCGGG
CGGCCCGACC TCGGCCTTAT CGCCGTGGCG GTGTGGACCG TGCTATCCTG CCTGTTCCAT
GCGGTCCGGC TGGCCCAGGC GCTGCGCCGT CGCAAGCGCG GGGTGAAGGT CCGGTCCTGG
CTGACGGTGT GA
 
Protein sequence
MTMRLTSGRA ASVLPTQASI GWPATSINAL NGWPKCSASG SPPGRWPASR ITVKAELIII 
VPCQPKAASA RNADVNSHMV IMNISSVPGV RSIGTNPTPI WGMSSTERLR RMAAAQKLRY
REESNGPVLL VSASHVFEPA WLKFMVDRPG QVLTLDGEKV IAHLTSDTGG GFPDGLDEVR
VEDNRVFYNA ALRKREEPVI AKLEPGTAKA IERKTYFGAY KGVTDILTKY LWPEWALVLT
RLAAKIGMSP NQVTAIGAAL CVLATWLFWI GEYGWGMAAG LVFMVLDTVD GKLARCTITS
SAWGNVFDHG VDLVHPPFWW WAWGVGLSHW GLAYTHLEFT LVMIAIVGGY VVQRAIEGAF
IRRFNGMHIH VWEKIDSDFR LITARRNPNM VILFVATLFG RPDLGLIAVA VWTVLSCLFH
AVRLAQALRR RKRGVKVRSW LTV