Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1307 |
Symbol | |
ID | 5200432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 1463149 |
End bp | 1464480 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640580854 |
Product | hypothetical protein |
Protein accession | YP_001261810 |
Protein GI | 148554228 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.618243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATGC GCCTGACGTC CGGACGGGCG GCGAGCGTGC TGCCGACCCA GGCGAGCATC GGCTGGCCGG CCACGTCGAT CAACGCCTTG AACGGCTGGC CGAAATGCTC CGCCAGCGGG TCGCCGCCGG GGCGCTGGCC GGCCAGCAGG ATCACGGTAA AAGCCGAATT GATCATCATC GTGCCTTGCC AGCCCAAGGC CGCGTCGGCA AGGAACGCCG ACGTCAACTC TCATATGGTG ATCATGAACA TCAGTAGTGT ACCCGGCGTC CGATCGATCG GAACCAACCC GACGCCGATC TGGGGCATGT CCAGTACCGA GCGGCTGCGG CGCATGGCCG CCGCCCAGAA GCTGCGGTAT CGCGAGGAAA GCAACGGCCC CGTCCTGCTG GTCTCGGCCA GCCATGTGTT CGAACCCGCC TGGCTGAAAT TCATGGTCGA CCGGCCGGGC CAGGTGCTGA CCCTCGACGG CGAGAAGGTG ATCGCCCATC TCACCTCCGA CACGGGCGGC GGCTTTCCCG ACGGCCTCGA CGAGGTGCGG GTCGAGGACA ACCGCGTCTT CTACAACGCC GCGCTGCGCA AGCGCGAGGA ACCGGTGATC GCGAAGCTCG AGCCCGGCAC CGCCAAGGCG ATCGAGCGCA AGACCTATTT CGGCGCCTAT AAGGGCGTCA CCGACATCCT CACCAAATAT CTGTGGCCCG AATGGGCGCT GGTGCTGACC CGCCTGGCCG CGAAGATCGG CATGTCGCCC AACCAGGTGA CGGCGATCGG CGCGGCGCTG TGCGTCCTCG CCACCTGGCT GTTCTGGATC GGCGAATATG GCTGGGGCAT GGCCGCGGGG CTGGTCTTCA TGGTGCTCGA CACCGTCGAC GGCAAGCTCG CCCGCTGCAC CATCACCTCC AGCGCGTGGG GCAACGTCTT CGACCATGGC GTCGACCTGG TCCATCCGCC CTTCTGGTGG TGGGCCTGGG GCGTCGGCCT GTCGCATTGG GGATTGGCCT ATACCCATCT CGAATTCACG CTGGTGATGA TCGCGATCGT CGGCGGCTAT GTCGTCCAGC GCGCGATCGA GGGCGCGTTC ATCCGCCGCT TCAACGGCAT GCACATCCAT GTCTGGGAGA AGATCGACAG CGACTTCCGC CTGATCACCG CGCGGCGCAA CCCGAACATG GTGATCCTGT TCGTCGCCAC GCTGTTCGGG CGGCCCGACC TCGGCCTTAT CGCCGTGGCG GTGTGGACCG TGCTATCCTG CCTGTTCCAT GCGGTCCGGC TGGCCCAGGC GCTGCGCCGT CGCAAGCGCG GGGTGAAGGT CCGGTCCTGG CTGACGGTGT GA
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Protein sequence | MTMRLTSGRA ASVLPTQASI GWPATSINAL NGWPKCSASG SPPGRWPASR ITVKAELIII VPCQPKAASA RNADVNSHMV IMNISSVPGV RSIGTNPTPI WGMSSTERLR RMAAAQKLRY REESNGPVLL VSASHVFEPA WLKFMVDRPG QVLTLDGEKV IAHLTSDTGG GFPDGLDEVR VEDNRVFYNA ALRKREEPVI AKLEPGTAKA IERKTYFGAY KGVTDILTKY LWPEWALVLT RLAAKIGMSP NQVTAIGAAL CVLATWLFWI GEYGWGMAAG LVFMVLDTVD GKLARCTITS SAWGNVFDHG VDLVHPPFWW WAWGVGLSHW GLAYTHLEFT LVMIAIVGGY VVQRAIEGAF IRRFNGMHIH VWEKIDSDFR LITARRNPNM VILFVATLFG RPDLGLIAVA VWTVLSCLFH AVRLAQALRR RKRGVKVRSW LTV
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