| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1304 |
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| Symbol | sdhB |
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| ID | 5200532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1460089 |
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| End bp | 1460874 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640580851 |
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| Product | succinate dehydrogenase iron-sulfur subunit |
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| Protein accession | YP_001261807 |
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| Protein GI | 148554225 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.936635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGAGT TCGCGCTTCC GAAGAACAGC AAGATCAAGA AGAACGGCAA GGTCCACAAG
GCGGCCCCCG ACGCGAAGGA CGTGAAGTCC TTCAAGATCT ATCGCTACGA TCCCGACAGC
GGCGAGAATC CGCGCTACGA CACGTTCGAG GTCGACCTCG CCGAATGCGG CCCGATGGTC
CTCGACGCGC TGATCAAGAT CAAGAGCGAG CAGGACCCGT CGGTCACCTT CCGCCGCTCG
TGCCGCGAGG GCATCTGCGG TTCCTGCTCG ATGAACATGA ACGGCAAGAA CGGCCTCGCC
TGCACCACCG CGATCGAGGA CTGCAAGGGC GAGGTCCGCA TCACCCCGCT GCCGCACATG
GACGTGATCA AGGACCTCGT TCCGGACTTC ACGCATTTCT ATGCGCAATA TGCGTCGATC
CAGCCCTGGC TGAAGACCGT CACCCCGGCC CCCTCGGGCA AGGAGCGGTT GCAGTCGCCC
GACGACCGCA ACAAGCTCGA CGGCCTCTAC GAGTGCATCC TGTGCGCCTG CTGCTCGACA
TCGTGCCCGA GCTACTGGTG GAACAGCGAC AAGTTCCTCG GCCCGGCGAT CCTGCTCCAG
GCCTATCGCT GGCTGGCCGA CAGCCGCGAC GAGATGACCG GCGAGCGGCT CGACGAGCTC
GAGGATCCGT TCCGTCTCTA TCGCTGCCAC ACGATCATGA ACTGCGCCAA TGTCTGCCCC
AAGGGCCTGA GCCCGGCCAA GGCGATCGGC GAGATCAAGA AGATGGTGGT CGAGCGGCAG
CTCTGA
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| Protein sequence | MAEFALPKNS KIKKNGKVHK AAPDAKDVKS FKIYRYDPDS GENPRYDTFE VDLAECGPMV
LDALIKIKSE QDPSVTFRRS CREGICGSCS MNMNGKNGLA CTTAIEDCKG EVRITPLPHM
DVIKDLVPDF THFYAQYASI QPWLKTVTPA PSGKERLQSP DDRNKLDGLY ECILCACCST
SCPSYWWNSD KFLGPAILLQ AYRWLADSRD EMTGERLDEL EDPFRLYRCH TIMNCANVCP
KGLSPAKAIG EIKKMVVERQ L
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